Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_004326 |
Symbol | |
ID | 8558087 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | + |
Start bp | 3011518 |
End bp | 3012774 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 646407448 |
Product | D-amino acid dehydrogenase small subunit |
Protein accession | YP_003286949 |
Protein GI | 262395095 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGTCA TCGTATTAGG CAGCGGCGTC ATCGGCTTAA CCTCTGCTTG GTATTTATCT CAAGCAGGCT ATCAAGTTAC CGTTATTGAC CGTCAACCAA GCAGTGCAAT GGAAACAAGT TTCGCCAATG CTGGGCAGAT CTCGTATGGC TATTCTTCGC CTTGGGCTGC GCCTGGTGTT CCTGTTAAAG CCATAAAGTG GTTAATGGAA GAGCATGCTC CACTCAAAAT CAAACCAACC CTCAATGCCG ATATGATCAG TTGGGCAAGT AAGATGGTGG CCAACTGCAC CCTGTCTCGC TACCAAGTCA ACAAAGCTCG CATGCTTTCG ATAGCTAACC ACAGTCGTAT GTGTCTGGAA CAATTACGTC AAGAACATGC CATTGAATAT CAAGGTCGCC AGTTCGGCAC CTTGCAAGTA TTTCGAACGC CTCAACAGCT GCAAGCCATT GAAAAGGATA TGCAGCTTCT AGAGCAAAGC GGGACTCGGT TTGAGTTGAT GGACGTAGAA CGCTGCATTG AACAAGAACC TGGACTGGAT CTTGTGAAAG ATAAGCTGGT TGGTGGCTTG CACCTGCCAG ATGACGAAAC AGGCGATTGC TATCAGTTTT GCCAACAACT AACAGAGCTC GCTAAGGCCC ATGGCGTCAG GTTCGAGTTC GACACCGAAG TAAGCAATTG GGTTACAGTA GGCAAAAAGA TCATGGGTGT CCAAACGAAC CGAGGACAGT TTAAAGCGGA CCAATATGTG GTTGCCTCTG GCAGCTATTC TACAGCGCTA CTCAAGCAAA TCGACATTGA AATTCCTGTC TATCCAGTAA AAGGCTATTC GCTCACCATC CCAATGAAAG ATGAGCACTT CTCTCCTCGC TCTACTGTGA TGGATGAAAC CTATAAAGTC GCCATGACTC GGTTTGATGA CAGAATTCGC GTAGCGGGCA CCGCAGAATT AGCAGGGTTT GATGCCTCCC TTCCGCAAAA ACGAAAAAAT ACCATCGAAA TGGTCATCCG TGATCTTTTC CCTCGCTGCG GCGACTTTAA CCAAGCCGAG TTTTGGAGTG GCTTTAGACC AATGACGCCT GATGGCACAC CGATTATCGG CGCGACCAAA TACGATAACC TTTTTACTAA CACTGGACAC GGTACTCTGG GTTGGACTAT GGCTTGTGGT TCTGGTCAAT TACTAGCGAG CATTATGGCT GGTGAAAAAG CGAAAGTGAT GGATGACACA GAGCTTAACC TTTGCCGTTA TGCATAA
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Protein sequence | MEVIVLGSGV IGLTSAWYLS QAGYQVTVID RQPSSAMETS FANAGQISYG YSSPWAAPGV PVKAIKWLME EHAPLKIKPT LNADMISWAS KMVANCTLSR YQVNKARMLS IANHSRMCLE QLRQEHAIEY QGRQFGTLQV FRTPQQLQAI EKDMQLLEQS GTRFELMDVE RCIEQEPGLD LVKDKLVGGL HLPDDETGDC YQFCQQLTEL AKAHGVRFEF DTEVSNWVTV GKKIMGVQTN RGQFKADQYV VASGSYSTAL LKQIDIEIPV YPVKGYSLTI PMKDEHFSPR STVMDETYKV AMTRFDDRIR VAGTAELAGF DASLPQKRKN TIEMVIRDLF PRCGDFNQAE FWSGFRPMTP DGTPIIGATK YDNLFTNTGH GTLGWTMACG SGQLLASIMA GEKAKVMDDT ELNLCRYA
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