Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_004265 |
Symbol | |
ID | 8558026 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | - |
Start bp | 2943714 |
End bp | 2944841 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 646407387 |
Product | diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase |
Protein accession | YP_003286888 |
Protein GI | 262395034 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0117] Pyrimidine deaminase |
TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain [TIGR00326] riboflavin biosynthesis protein RibD |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000582374 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTCAAC ACACTCCTGA AAGAGCGTTT TCTGATTTAG ATTTCGCCAT GATGTCACGA GCTATTAAGT TAGCGAGACG TGGCATTTAT ACCACCGCCC CAAATCCAAA TGTGGGGTGC GTCATCGTTC GTGATGAAGA AATTGTTGGT GAGGGCTATC ACCACCGCGC AGGTGAGCCG CATGCCGAAG TGCACGCGAT GCGCATGGCG GGTGAAAAAG CAGTCGGTGC AACCGCTTAT GTGACGCTCG AACCTTGCTC TCATTACGGC CGTACACCGC CATGTGCTGA AGGGCTAATC AAAGCCAAAG TGGCACGTGT GGTTTGCGCA ATGGTAGACC CAAACCCTAA AGTTGCGGGG CGGGGCATCC AGATGTTGCG TGATGCCGGA ATTGAAGTAC AAATCGGCTT GTTAGAGCAA GATGCCCTTG CCCTTAACCC TGGTTTTATA AAGTACATGC GTACAGGCAT GCCGTTTGTT CAATTAAAAA TGGCAGCCAG TTTGGATGGG CAAAGCGCAC TCAGCAATGG GCAGAGCCAA TGGATCACCT CCCCAGTGGC CCGCCAAGAT GTGCAGCGTT ATCGAGCGAT GAGTGGTGGT ATTCTCTCTA CCAGCAAAAC GGTGATTGAT GATAATGCGT CACTCAATGT GCGTTGGGAT GACTTACCTA CCAGTGTTCA AGCGCAGTAT TTACGAGAAG AACTTCGTCA ACCAGTACGT GTAATCTTAG ACCGTCAGAA CCATTTAACG GATGCGCTCA AGCTGTTCCA CACCGATGGA GAGCGAGTTA TTGTTAGCCC AGATGGAGAC TGTATCCCTC TATTGGACAG CGCTGACCAA ATTGACTTAT CAACGACATT AAAACGTATC TCGGATGAGC ACCACATCAA TCACTTATGG GTTGAAGCTG GAGCTACGCT AGCGAGTGCG ATGATAAAGG CTAACCTTGT AGATGAGCTC ATTGTTTACC TTGCGCCAAA ACTCATGGGC AGCGATGGTC GGGGGCTTAT CGGTGCTTTA GGGTTAAGCG CTATGGCTGA CGTCATAGAT TTAAACATTA CAGACGTTCG TATGGTTGGG GTAGACATTC GCATCACCGC CACCATAAAA CGTAATGAAC TTAGATAA
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Protein sequence | MTQHTPERAF SDLDFAMMSR AIKLARRGIY TTAPNPNVGC VIVRDEEIVG EGYHHRAGEP HAEVHAMRMA GEKAVGATAY VTLEPCSHYG RTPPCAEGLI KAKVARVVCA MVDPNPKVAG RGIQMLRDAG IEVQIGLLEQ DALALNPGFI KYMRTGMPFV QLKMAASLDG QSALSNGQSQ WITSPVARQD VQRYRAMSGG ILSTSKTVID DNASLNVRWD DLPTSVQAQY LREELRQPVR VILDRQNHLT DALKLFHTDG ERVIVSPDGD CIPLLDSADQ IDLSTTLKRI SDEHHINHLW VEAGATLASA MIKANLVDEL IVYLAPKLMG SDGRGLIGAL GLSAMADVID LNITDVRMVG VDIRITATIK RNELR
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