Gene VEA_004237 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_004237 
Symbol 
ID8557998 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp2916224 
End bp2916775 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content46% 
IMG OID646407359 
ProductD-glycero-D-manno-heptose 1,7-bisphosphate phosphatase 
Protein accessionYP_003286860 
Protein GI262395006 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0241] Histidinol phosphatase and related phosphatases 
TIGRFAM ID[TIGR00213] D,D-heptose 1,7-bisphosphate phosphatase
[TIGR01656] histidinol-phosphate phosphatase family domain
[TIGR01662] HAD-superfamily hydrolase, subfamily IIIA 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCAAAAC CTGCTGTTTT TATCGATCGT GATGGCGTGA TAAACGTTGA CCACGGCTAC 
GTTCATGACG AACATGATTT TGAGTACATT GATGGTGTGT TTGAAGCGAC GAAAGCGCTG
AAAGATCAAG GTTACCTCTT AGTGCTAGTG ACGAATCAAT CGGGCATCGC ACGTGGTAAA
TTCAGTGAAG ACCGTTTCTT GTCTCTGACT CAATGGATGG ACTGGAACTT TGTTGATCAT
GGTGTTGAGT TTGATGGTAT CTACTACTGT CCACATCACC CTGAACATGG CATTGGGGAT
TACAAGCAGG ATTGTGATTG CCGCAAGCCT AAGCCTGGTA TGTTTATCTC TGCTCGCGAC
TTCTTGAAAA TCGACATGGA AAAATCTGTG ATGATTGGTG ATAAAGCCGA AGACATGATG
GCAGCAGAAG CCGCAGGCGT TGGCACCAAG ATTTTGGTTC GCACAGGTAA GCCAATCACC
GAGCAAGGTG AAGCATTGGC AACGGTTGTG CTTGATAGTG TTGCTGACGT GCCTGCATAT
CTAAAGAAAT AA
 
Protein sequence
MAKPAVFIDR DGVINVDHGY VHDEHDFEYI DGVFEATKAL KDQGYLLVLV TNQSGIARGK 
FSEDRFLSLT QWMDWNFVDH GVEFDGIYYC PHHPEHGIGD YKQDCDCRKP KPGMFISARD
FLKIDMEKSV MIGDKAEDMM AAEAAGVGTK ILVRTGKPIT EQGEALATVV LDSVADVPAY
LKK