| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_004186 |
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| Symbol | |
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| ID | 8557926 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 2857652 |
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| End bp | 2858773 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 646407287 |
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| Product | membrane protein |
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| Protein accession | YP_003286809 |
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| Protein GI | 262394955 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.920547 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTTACC TAAAGAAAAG CCTACTTGCT ACGGCAATCA CAGGCATGAT GTTCAGTGGT
GCTGCATTTG CTGATGGTGC AAACAGTGAC GCAGCAAAAG AGTTCCTAAC CAAAGATTCA
TTCTCTTATG AAGTTTACGG GATCATCGCG ATGCAGGCCG CGTACCGCGA TTACGATTCT
GGCAACAAAG CAACGGACGA TGATCTAGGT GGCATGCAGC TAAACAACGA ATCTCGCATC
GGTTTCCGCG GTAAAAAACA ATTTGCTAAC TTCGGTCCTA CTTTTATTTG GCAAATCGAA
GGTGGTTACG TTGACCCTAG CTTTGGCGGC GAGGGTGCAG GTCTTGGTGA ACGTGACACA
TTCGTCGGTT TTGAAAGTGC ATCTTGGGGC CAAGTTCGTT TAGGTCGAGT ATTAACACCG
ATGTACGAAT TGGTTGACTG GCCTGCATCT AACCCAGGTC TCGGTGATGT TTACGACTGG
GGTGGTGCAA TCGGTGGTGC TAAGTATCAA GACCGTCAAT CAAACACCAT TCGTTGGGAC
TCGCCAATGT ATGCGGACAA ATTCTCTCTA GATATCGCGG CAGGTGCAGG TGACAAAGCG
GGTCTGGGTG AAGGTGATGA CTACTGGGGT GGTATCGCAG CGCACTACAA AATTGGTCCA
ATTCAGTTAG ATGCCGCATA CGAGGGTAAC CGTAACATTA AGATGGAAGG CCAAACGTGG
GAAAACAACA CATACTTGGT GGGTGCTCAA GGCTGGTTTG ATAACGGTAT TTCTTTCTTC
GCGCAATACA AATACATGGA AGCTGACGCA AGCAACGGCG TGAGTGAGAA GCAAGACGCA
ATGTCTGCCG CTATCATGTA CACCACTGGT GATTGGCAAT ACAAACTGGC TTACGCAGCG
AACTTTGATC TAGAGCGTGA TGGTAAGACC ATTAACGATA CAGCAGACGA TGTACTATCT
GCACAAGTTA TGTACTTCGT AGACCCATCG GCAGTGCTTT ACGTACGTGC TCGTACTCTA
GACTTTGGCG ACGGTGCATA TCAACTGGAT AAACCAACAG AAGCGCGTTG GAAATCTGCG
GACTACGATG AGTTCTCTGT GGGTGTTGAA TACTACTTCT AA
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| Protein sequence | MSYLKKSLLA TAITGMMFSG AAFADGANSD AAKEFLTKDS FSYEVYGIIA MQAAYRDYDS
GNKATDDDLG GMQLNNESRI GFRGKKQFAN FGPTFIWQIE GGYVDPSFGG EGAGLGERDT
FVGFESASWG QVRLGRVLTP MYELVDWPAS NPGLGDVYDW GGAIGGAKYQ DRQSNTIRWD
SPMYADKFSL DIAAGAGDKA GLGEGDDYWG GIAAHYKIGP IQLDAAYEGN RNIKMEGQTW
ENNTYLVGAQ GWFDNGISFF AQYKYMEADA SNGVSEKQDA MSAAIMYTTG DWQYKLAYAA
NFDLERDGKT INDTADDVLS AQVMYFVDPS AVLYVRARTL DFGDGAYQLD KPTEARWKSA
DYDEFSVGVE YYF
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