Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_004162 |
Symbol | |
ID | 8557901 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | - |
Start bp | 2833791 |
End bp | 2834945 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 646407262 |
Product | flagellin protein FlaC |
Protein accession | YP_003286785 |
Protein GI | 262394931 |
COG category | [N] Cell motility |
COG ID | [COG1344] Flagellin and related hook-associated proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.930757 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGTAA CAGTTAGTAC TAACGTCTCC GCGATGACCG CGCAGCGTTA CCTAAACAAA GCGACTGACG AATTAAATAC GTCGATGGAG CGCTTATCTT CAGGACATAA GATTAACAGT GCAAAAGATG ATGCGGCAGG TCTACAGATC TCTAATCGCT TAACTGCACA GTCTCGTGGT CTAGATGTCG CAATGCGTAA CGCGAACGAT GGTATCTCGA TTGCACAAAC CGCTGAAGGT GCGATGAATG AGGCAACATC TGTCATGCAA CGTATGCGTG ACCTTGCTAT TCAATCATCG AACGGTACTA ACTCTCCGGC TGAGCGTCAG GCGATCAACG AAGAGTCAAT GGCATTGATT GACGAGCTAA ACCGTATCGC AGAAACCACG TCATTCGGTG GCCGTCGTCT ATTGAACGGC TCATTCGGTG AAGCGGCATT CCAGATTGGT GCGAGCTCAG GTGAAGCAAT GATTATGGGG CTAACCAGCA TTCGTGCGGA CGATACTCGC ATGGGCGGTG TGACCTTCTT ATCGGAAAAC GGTAAAGATA AAGATTGGGG CGTTGACCCA GCTAAATCGG ATCTAAAAAT CACTTTGCCA GGTATGGGTG AAGACGAAGA CGGCAATGTC GATGATCTAG AAATCAACAT TAATGCAAAA GCAGGTGACG ACATCGAAGA GCTAGCAACG TACATCAATG GTCAATCAGA CATGATCAAC GCGTCTGTAA GCGAAGATGG CAAGTTACAA GTTTTTGTTG CACATCCAAA CGTTCAGGGT GAAATTTCAA TTTCGGGTGG ATTGGCGTCT GAGCTTGGTT TGAGCGATGA ACCTCTTAGA ACATCAGTAC AAGATATTGA TATGACAACC GTACAAGGTT CTCAAAACGC TATCTCTGTG CTGGATTCGG CACTGAAATA CGTGGATTCA CAACGTGCGG ATCTGGGTGC GAAGCAAAAC CGTCTGAGCC ACAGCATCAA CAACTTGGCA AACATCCAAG AAAACGTTGA CGCGTCGAAC AGCCGAATTA AAGACACGGA CTTTGCGAAA GAAACCACGC AAATGACCAA AGCACAAATT TTGCAACAAG CAGGTACATC GATTCTTGCT CAAGCGAAAC AGTTGCCAAA CTCTGCAATG TCACTATTGC AGTAG
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Protein sequence | MAVTVSTNVS AMTAQRYLNK ATDELNTSME RLSSGHKINS AKDDAAGLQI SNRLTAQSRG LDVAMRNAND GISIAQTAEG AMNEATSVMQ RMRDLAIQSS NGTNSPAERQ AINEESMALI DELNRIAETT SFGGRRLLNG SFGEAAFQIG ASSGEAMIMG LTSIRADDTR MGGVTFLSEN GKDKDWGVDP AKSDLKITLP GMGEDEDGNV DDLEININAK AGDDIEELAT YINGQSDMIN ASVSEDGKLQ VFVAHPNVQG EISISGGLAS ELGLSDEPLR TSVQDIDMTT VQGSQNAISV LDSALKYVDS QRADLGAKQN RLSHSINNLA NIQENVDASN SRIKDTDFAK ETTQMTKAQI LQQAGTSILA QAKQLPNSAM SLLQ
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