| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_004130 |
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| Symbol | |
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| ID | 8557870 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 2797663 |
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| End bp | 2798877 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646407232 |
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| Product | N-acetylglucosamine-6P-responsive transcriptional repressor NagC ROK family |
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| Protein accession | YP_003286755 |
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| Protein GI | 262394901 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1940] Transcriptional regulator/sugar kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGGCG GACAGATTGG TAATGTAGAT TTAGTAAAAC AGCTTAACAG CGCTGCGGTA
TATAGGCTGA TTGATCAGCA AGGTCCTATC TCCCGTATTC AAGTCGCAGA TGTGAGCCAG
CTCGCACCTG CTAGTGTTAC CAAAATAACC CGCCAACTTT TAGAGCGCGG CCTTATTAAA
GAGGTCGCCC AGCAAGCTTC AACTGGTGGT CGTCGTGCAA TCTCTCTGAC CACCGAAGTC
AAACCCTTCC ACTCTATTGC GGTTCGTTTA GGTCGAGATT ACGTACAATT TTGTTTGTAC
GATTTAGGTG GCACTGCACT TGCGGAAGAT CAACACGAAC TGCATTACAC CAACCAAGCT
GACTTGATCG CTGGGCTTAT CGATTTACTT AAAGACTTCG TAAACCGTTG CGAAGACAAA
ATTGATCAGC TCATCGCAAT TGGTATTACG CTACCGGGCC TTGTAAACCC AACAACAGGC
GTAGTTGAGT ACATGCCGAA TACCGATATC GATAATCTGG CGCTGGGTGA AATTGTTGGA
GAGAAGTTTA ATACCGCATG CTTTGTTGGG AATGACGTAC GTGGCATGGC GTTAGCGGAG
CACTACTTTG GGGCAAGCCA AGACTGTCAG GACTCCATTT TAGTTAGCGT TCACCGCGGT
ACTGGCGCAG GTATTATCGT TAACGGCCAG GTTTTTCTTG GCTTTAACCG CAACGTCGGT
GAAATTGGTC ATATTCAAAT CGATCCGCTT GGTGAACAGT GCCAATGTGG GAACTTTGGT
TGCTTAGAAA CCGTAGCAGC AAACCCAGCC ATTATCCAAC GAGTAAAACA ACTGATTGCT
CAAGGCTATG AGTCAAGCTT GACTGACCTT GAAAACATCA CGATTGAAGC AGTGTGTCAG
CATGCAATGG ATGGTGACGA ACTTGCAAAG CAGAGTTTAG TGCGAGTGGG TAACCAGTTA
GGTAAAGCGA TTGCAATTAC CGTTAACTTG TTTAACCCTC AGAAAATTGT CATTGCGGGC
GACATTACTG CTGCACAAGA CATAGTCTTC CCTGCAATTC AACGTAATGT CGAAAATCAA
TCTCTCAAAA CTTTCCATAA CGACCTTCCT ATCGTGGCTT CACACATTGA TAAGCAGCCA
ACGATGGGCG CATTTGCGAT GATTAAACGC GCAATGCTAA ACGGAGTTTT GTTACAAAAG
TTACTTGAAG ACTAA
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| Protein sequence | MNGGQIGNVD LVKQLNSAAV YRLIDQQGPI SRIQVADVSQ LAPASVTKIT RQLLERGLIK
EVAQQASTGG RRAISLTTEV KPFHSIAVRL GRDYVQFCLY DLGGTALAED QHELHYTNQA
DLIAGLIDLL KDFVNRCEDK IDQLIAIGIT LPGLVNPTTG VVEYMPNTDI DNLALGEIVG
EKFNTACFVG NDVRGMALAE HYFGASQDCQ DSILVSVHRG TGAGIIVNGQ VFLGFNRNVG
EIGHIQIDPL GEQCQCGNFG CLETVAANPA IIQRVKQLIA QGYESSLTDL ENITIEAVCQ
HAMDGDELAK QSLVRVGNQL GKAIAITVNL FNPQKIVIAG DITAAQDIVF PAIQRNVENQ
SLKTFHNDLP IVASHIDKQP TMGAFAMIKR AMLNGVLLQK LLED
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