| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_004082 |
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| Symbol | |
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| ID | 8557822 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 2744108 |
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| End bp | 2745223 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646407184 |
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| Product | NupC family protein |
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| Protein accession | YP_003286707 |
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| Protein GI | 262394853 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1972] Nucleoside permease |
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| TIGRFAM ID | [TIGR00804] nucleoside transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.117555 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCGTTTG CGTTTGCTTT GCAGGTACTG TTTGCGTTGT TGGTTTTATA TGTACCAGCA
GGACGAGATG CGCTGAATTC AGTGAGCAGC GTAGTGTCGA ATTTGATCAA CTATGGTCAA
GAGGGCATTG CGTTTTTATT CGGTAATTTG GCGACAGGGG GCTTCACCTT TGCGATCAAT
GTTCTGGGTA TCATCGTTTT CTTCTCCTCT CTTATCTCAG GTCTTTATCA CATTGGTGTG
ATGCCAAAAA TCATTAACTT TATCGGCGGT GGTATTCAAA AGCTGCTGGG TATCGGTCGT
GCAGAGTCTT TGTCTGCTAC GGCGAATATC TTTGTTGGCA CCATTGAAGC GCCATTGATG
GTAAAGCCAT ACCTAAAGCA CATGACCGAC TCGCAGTTCT TTGCGGTGAT GACAGGTGGT
TTGGCTTCTG TTGCTGGTGG AACGTTGGTC GGTTACGCGT CACTGGGCGT TGACCTTAAC
TACCTGATCG CTGCCGCATT TATGTCGGCA CCTGCGGGCT TGTTAATGGC AAAAATCTTA
ATGCCAGAAG ATACGGATAA AGCAGCAGAT ATCGACATTA GCCAAGTTGA AATTCCACGT
GCAACCAACG TAGTAGAAGC ATTAGCCGAT GGTGCAATGG CGGGTGTACG CATTGCTGTA
TCGGTAGGTG GTACGCTATT GGCGTTCATC AGTGTCATTG CAATGTTAAA CGGCATGCTA
GGTTGGATTG GTGACCTTGT TGGGACGCCA CTAAGCTTCG AGCTGATCCT AGGTTATGTA
TTCGCACCTG TCGCTTGGTT ATTAGGTGTA CCATGGCAAG AAGCAACCAC AGCAGGCTCG
CTGATTGGTA ATAAGATTGT GGTGAATGAG TTCGTTGCTT TCATCCAGCT TGCTGAAGTG
AAGTCTCAAC TCAGTGAACA CTCACAAGCA ATCGTGACGT TTGCTTTGTG TGGTTTTGCA
AACATTTCAA GTATGGCGAT GTTGATTGGC GGACTGGGCT CATTGGTACC TGAAAAGCGT
GCATTTGTTT CTAAGCATGG TTTCCGTGCG ATTATCGCTG GTGTGATGGC GAACTTAATG
AGCGCTTCAA TTGCGGGCGT GATTTTAAGT CTGTAA
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| Protein sequence | MSFAFALQVL FALLVLYVPA GRDALNSVSS VVSNLINYGQ EGIAFLFGNL ATGGFTFAIN
VLGIIVFFSS LISGLYHIGV MPKIINFIGG GIQKLLGIGR AESLSATANI FVGTIEAPLM
VKPYLKHMTD SQFFAVMTGG LASVAGGTLV GYASLGVDLN YLIAAAFMSA PAGLLMAKIL
MPEDTDKAAD IDISQVEIPR ATNVVEALAD GAMAGVRIAV SVGGTLLAFI SVIAMLNGML
GWIGDLVGTP LSFELILGYV FAPVAWLLGV PWQEATTAGS LIGNKIVVNE FVAFIQLAEV
KSQLSEHSQA IVTFALCGFA NISSMAMLIG GLGSLVPEKR AFVSKHGFRA IIAGVMANLM
SASIAGVILS L
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