Gene VEA_004075 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_004075 
Symbol 
ID8557814 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp2737364 
End bp2738551 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content49% 
IMG OID646407176 
Product3-oxoacyl-[acyl-carrier-protein] synthase FabV inferred for ABFAE pathway 
Protein accessionYP_003286700 
Protein GI262394846 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTATTC GCTCTTCTCA ACCTTTGTAT ATTCAGGCCT GTGGCTTTCA CTCTGCCATG 
GGACAAGATG ACGCCATCAT CCACCAGTGT TTATCAGGAG CGAAACCATC CAACATGGTG
GTTGACCAAG ATATTTTAAA TTCAGGCCGC CAAACAGTAA TCGGTCGAAT TGCACAGACG
TTACCGCAAT TACCGACCGC ACTCAGCCAG TTTGATACGA GAAACAACCG CCTCGCACTT
TCGGCTTTGC AGCAAATCGA AAGCGACGTG CGTGACGCCA TGGCTAAATA TGGTCGTGAC
CGTATCGCAG TCGTGATCGG CACCAGCACG TCTGGCATTT CAGATGGCGA AATCGCATTT
GGCGAAAAGC TGGCAAATGG TGAGTTTCCC GCCGACTACC ATTACACCAA ACAAGAACTT
GGCAACTGCA GCGATTTTAT TGCCGCCTAC TTTGATTTGA GCGGCCCACA TTACTCAGTT
TCCACCGCTT GCTCTTCTAG TGGTCGCGTC TTTTTAACCG CGCAACGCCT GATTCGCTCT
GGCATTGTTG ATGCGGTCAT TGTAGGTGGT GTGGATACCA TTTGTCGCCT AACGCTAAAC
GGCTTTAACG GTTTAGAAGC TCTATCCGAT ACCCTTTGTA AGCCGTTTGA CCAGCATCGC
AACGGCATCA ATATCGGCGA AGCCGCAGCA TTAATGTTGC TAAGCAAAAC ACCTGCGCCC
GTTGCTCTTC TCGGAGCTGG CGATAGCTCA GACGCGCACC ACATTTCCGC ACCACACCCA
GAAGGGTTAG GCGCAGAAGA AGCGATGAAA AAAGCGTTGG CCAATGCAGG ACTTGCAGCG
CAAGACATTG GTTACATCAA CGCGCATGGC ACAGCAACGC CGTTAAACGA TGCGATGGAA
AGCAAAGCCA TTCATCGCTG CTTTGGAGAC TCCGTTCCCG TAAGCTCGAC AAAGCCACTC
ACCGGACACA CATTAGGCGC AGCAAGTGCA ACGGAAGCCG CGATCGCTTG GCATATTCTC
AAGTACAACC TTGATTTGCC AATACAACAC TGCGAAACCA AAGCAGACGA TATCCATATA
TCGTTAGTTG AGACGCCAAC CAAACTGGGT AACAAAGCGA TTCTCAGCAA CTCTTTTGCT
TTTGGTGGCA ATAATATTAG TCTTATTTTT GGTTACGCTC ATGACTAA
 
Protein sequence
MPIRSSQPLY IQACGFHSAM GQDDAIIHQC LSGAKPSNMV VDQDILNSGR QTVIGRIAQT 
LPQLPTALSQ FDTRNNRLAL SALQQIESDV RDAMAKYGRD RIAVVIGTST SGISDGEIAF
GEKLANGEFP ADYHYTKQEL GNCSDFIAAY FDLSGPHYSV STACSSSGRV FLTAQRLIRS
GIVDAVIVGG VDTICRLTLN GFNGLEALSD TLCKPFDQHR NGINIGEAAA LMLLSKTPAP
VALLGAGDSS DAHHISAPHP EGLGAEEAMK KALANAGLAA QDIGYINAHG TATPLNDAME
SKAIHRCFGD SVPVSSTKPL TGHTLGAASA TEAAIAWHIL KYNLDLPIQH CETKADDIHI
SLVETPTKLG NKAILSNSFA FGGNNISLIF GYAHD