| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_004000 |
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| Symbol | |
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| ID | 8557736 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 2648477 |
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| End bp | 2649067 |
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| Gene Length | 591 bp |
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| Protein Length | 196 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 646407098 |
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| Product | putative lipoprotein |
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| Protein accession | YP_003286625 |
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| Protein GI | 262394771 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3417] Collagen-binding surface adhesin SpaP (antigen I/II family) |
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| TIGRFAM ID | [TIGR02722] uncharacterized proteobacterial lipoprotein |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAAAA GTATTATTGC TCTTTTAGGT CTTGCCGTCA TTTTGGGTGG CTGTTCTAAC
AAAGTCTCTT ACGGCGATGC GCAAGCAACA GAAACCACAA CTATCGATTT TGGCTCAACA
GATTTACAAA AAATCGCGGC TGAAATGGTT GATAGCATGA TGATGTCGGG TTCTGTAGCA
GCAATTACTC GTGATCAACG TCCTATCGTT TTTGTTGAGC GAATTAAGAA CAAGACCAGT
GAACACATTG ACACTGAATC CATTACCGAC ACTATTTCTA CTAAGATGCT GAACTCTGGT
AAGTTCCGCT TTGTTGATAT GGATCGTGTT GAGTCTGTGC GTGAACAGCT TAACTTCCAA
AACACGGATG AGCTGGTTAA CCAAAGCACA GCGATCCAAT TTGGTAAAAT GGTGGGTGCG
CAATACATGC TTTACGGTAA CCTATCTAGC ATCGTCAAAA ATGCAGGTAG CGATAAAGAT
GTATACTACA AGATGACCAT GCGCCTAATG GACCTAGAAA CAGGCTTGAT TGAGTGGGCG
GATGAAACGG AAATTCGTAA AGCGCAATCG AAGAGCTTAT TCGGTCTTTA A
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| Protein sequence | MKKSIIALLG LAVILGGCSN KVSYGDAQAT ETTTIDFGST DLQKIAAEMV DSMMMSGSVA
AITRDQRPIV FVERIKNKTS EHIDTESITD TISTKMLNSG KFRFVDMDRV ESVREQLNFQ
NTDELVNQST AIQFGKMVGA QYMLYGNLSS IVKNAGSDKD VYYKMTMRLM DLETGLIEWA
DETEIRKAQS KSLFGL
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