Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_003959 |
Symbol | |
ID | 8557695 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | - |
Start bp | 2598017 |
End bp | 2600242 |
Gene Length | 2226 bp |
Protein Length | 741 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 646407057 |
Product | isocitrate dehydrogenase [NADP] |
Protein accession | YP_003286584 |
Protein GI | 262394730 |
COG category | [C] Energy production and conversion |
COG ID | [COG2838] Monomeric isocitrate dehydrogenase |
TIGRFAM ID | [TIGR00178] isocitrate dehydrogenase, NADP-dependent, monomeric type |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTACAG AAAAACCTAC AATTATCTAC ACCATCACTG ATGAAGCGCC GGCGCTAGCA ACTTATTCAT TACTACCAAT CATTCAATCA TTCACAGCAT CGTCTGGCAT CAATGTAGAT ACTCGTGATA TTTCACTAGC AGGTCGAATT ATCGCTAACT TCCCAGAGCA TCTAAAAGAA GAACAGCGCA TTGGCGATGC GTTGACAGAG CTTGGTGAAC TAGCTCAAAC TCCAGAAGCA AATATCATCA AGCTACCTAA CATTTCAGCT TCAGTTCCTC AGCTTAAAGC GGCGATTAAA GAGCTTCAGG CGAAAGGTTA CGATTTACCA AACTACCCAG AAGAACCGAG CACGTACGAA GAGAAAGCGA TTAAAGCGGC TTACGACAAA ATCAAAGGTA GTGCGGTTAA CCCAGTACTT CGTGAAGGTA ACTCAGATCG TCGTGCTCCA ACTTCGGTTA AGAACTACGC GAAGAAAAAT CCACATTCAA TGGGTGCGTG GTCAGCAGAG TCTAAGTCTC ATGTCGCGAG CATGTCAGAT AATGACTTCT TTGGTAGCGA AAAGTCTACG ACTATCTCTG GTGCAACAGA GGTAAAAATC GAGTTTGTTG GTAATGATGG TGCAGTTAAA GAGCTCAAGT CTGCGTTCCC ATTACTAGAT AAAGAAGTCA TTGACACTTC AGTGATGAAG AAGAAGGCGC TGGTTGAATT TTTCGAGAAA GAGATTGCTG AAGCGAAAGC ACAAGACGTG CTGCTGTCTC TTCATATGAA AGCGACGATG ATGAAGGTTT CTGACCCAGT CATTTTCGGC CATGCAGTAA AAGTGTACTA CAAAGACGTT TTCGATAAAT ACGGTAAGCT GTTTGAAGAA CTGGGCGTTG ATGTAAACAA TGGCATTGGT GATGTTTACT CGAAAATTGA GTCTCTACCT GAAGCGCAAA AAGCAGAAAT TGAAGCGGCA ATTCAAGCGG TTTACCAAAT TCAACCAGAA CTTGCGATGG TTGACTCTGA TCGTGGTATC ACAAACTTAC ATGTACCAAG CGACATTATT GTAGACGCTT CTATGCCAGC AATGCTTCGC TCTTCTGGTC AAATGTGGGG ACCAGATGGT AAACAAAAAG ACACCAAAGC GATGATACCA GATCGTAGCT ACGCAGGTAT TTACCAAGCG GTGATTGATT TCTGTAAAGA GCACGGCGCA TTTGACCCGA CCACTATGGG TAGCGTGCCT AACGTTGGCT TAATGGCTCA AAAGGCAGAA GAGTATGGTT CTCACGACAA GACATTCATT CTAGACGCAG CGGGTACTGT TCGCGTTGTT GATACTGCGG GTAACGTATT GTTAGAGCAA GCGGTTGAAG AAGGCGATAT CTTCCGTATG TGTCAGGTGA AGGACGCACC AATCCAAGAC TGGGTTAAAC TAGCAGTGAC TCGCGCACGT GCAACAGGTG TTCCAGCCGT ATTCTGGCTA GACGAAAACC GTGCGCACGA TGCTGAACTC ATTAAGAAAG TAAATACCTA CTTACCTGAG CACGATACTG ATGGTCTAGA GATTAAGATC CTATCTCCTG TTGATGCTTG TAAGTACTCG CTAGAGCGTA TGAAAGCGGG TCTGGATACT ATCTCTGTAA CGGGTAACGT TCTTCGTGAC TACCTAACAG ACCTGTTCCC AATTCTAGAG TTAGGTACGT CAGCTAAGAT GCTATCTATC GTTCCATTGA TGAATGGCGG TGGTCTATTT GAAACAGGTG CTGGTGGTTC TGCTCCTAAG CATGTTCAAC AAGTAGAAAA AGAGAATCAC CTTCGTTGGG ATTCTTTAGG TGAGTTCTTA GCACTAGCTG CATCCCTAGA ACATCTAAGT GTGGTGGCAA ACAACCCGAA AGCGCAAGTT TTGGCGGATA CGCTAGACAA AGCGACTGGT GAGTTTTTAG ATACCAACAA GTCTCCATCA CGTAAAGTGG GCGAATTAGA TAATCGCGGT AGTCATTTCT ACCTCGCACT TTACTGGGCG AAAGCACTTG CCGAGCAAAC AGACGATGCT GATCTCGCTG CTGAGTTTGC ACCGATTGCG AAAGCGTTGT CAGAGCATGA AGAAAAAATC GTCGCTGAGC TAAACAACGC ACAGGGTGTG AAAGGAGAAC TGGGCGGTTA CTACCTGCTA GACGATGCAT TGGTTTCTAA GTTGATGCGC CCAAGCGAAA CCTTTAACGC GATCATTAAC AAGTAA
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Protein sequence | MPTEKPTIIY TITDEAPALA TYSLLPIIQS FTASSGINVD TRDISLAGRI IANFPEHLKE EQRIGDALTE LGELAQTPEA NIIKLPNISA SVPQLKAAIK ELQAKGYDLP NYPEEPSTYE EKAIKAAYDK IKGSAVNPVL REGNSDRRAP TSVKNYAKKN PHSMGAWSAE SKSHVASMSD NDFFGSEKST TISGATEVKI EFVGNDGAVK ELKSAFPLLD KEVIDTSVMK KKALVEFFEK EIAEAKAQDV LLSLHMKATM MKVSDPVIFG HAVKVYYKDV FDKYGKLFEE LGVDVNNGIG DVYSKIESLP EAQKAEIEAA IQAVYQIQPE LAMVDSDRGI TNLHVPSDII VDASMPAMLR SSGQMWGPDG KQKDTKAMIP DRSYAGIYQA VIDFCKEHGA FDPTTMGSVP NVGLMAQKAE EYGSHDKTFI LDAAGTVRVV DTAGNVLLEQ AVEEGDIFRM CQVKDAPIQD WVKLAVTRAR ATGVPAVFWL DENRAHDAEL IKKVNTYLPE HDTDGLEIKI LSPVDACKYS LERMKAGLDT ISVTGNVLRD YLTDLFPILE LGTSAKMLSI VPLMNGGGLF ETGAGGSAPK HVQQVEKENH LRWDSLGEFL ALAASLEHLS VVANNPKAQV LADTLDKATG EFLDTNKSPS RKVGELDNRG SHFYLALYWA KALAEQTDDA DLAAEFAPIA KALSEHEEKI VAELNNAQGV KGELGGYYLL DDALVSKLMR PSETFNAIIN K
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