| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003925 |
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| Symbol | |
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| ID | 8557661 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 2559416 |
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| End bp | 2560162 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 646407023 |
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| Product | hypothetical protein |
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| Protein accession | YP_003286550 |
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| Protein GI | 262394696 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0217] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00219055 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAGGTC ATAGTAAATG GGCGAATATT CGTCACCGTA AAGCAGCGCA AGATGCGAAG
CGCGGCAAAA TCTTTACCAA ATTAATCCGT GAAATCGTTG TTGCGGCAAA AGAGGGAGGC
GGTGAGCCAG AAAATAACCC ACGTTTGCGA GCTGCAATTG ATAAAGCGTT GTCTAACAAC
ATGACGCGTG ACACTGTCAA CCGCGCTGTC AGCCGAGGTG CTGGTGGTGA AGGCGATGAC
AATATGGAAA CCGTAATCTA TGAAGGTTAT GGCCCGGGTG GCACTGCGGT CATGGTCGAA
TGTATGACGG ATAACCGAAA TCGCACAGTA TCTGGCGTAC GCCATGCGTT CTCGAAGTCA
GGAGGCAATC TGGGTACGGA TGGTAGTGTA AACTATCTTT TCGACAAGAA AGGCGTGATC
TCATACGCCC CAGGTTTAGA TGAAGATGTG GTGATGGAAG TGGCGTTAGA AAGTGGCGCT
GATGACATCG AAACATCAGA AGATGGCTCG ATTGATGTTT ACACCGCGCC AAGCGATTTT
GGACTCGTAA AAGATGCCCT TGATGCTGCC GGTTTTGAGG CGGAGAACGC CGAAGTGTCG
CTTATCCCTT CAACGAAAGC AGAACTGGAT GTGGACACTG CGCCAAAACT GCTTCGTTTG
ATTGACGCTT TAGAAGATCT GGACGATGTT CAGGAGGTTT ATCACAACGG TGACATCTCT
GACGACGTTG CAGCCTCTCT AGAGTAA
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| Protein sequence | MAGHSKWANI RHRKAAQDAK RGKIFTKLIR EIVVAAKEGG GEPENNPRLR AAIDKALSNN
MTRDTVNRAV SRGAGGEGDD NMETVIYEGY GPGGTAVMVE CMTDNRNRTV SGVRHAFSKS
GGNLGTDGSV NYLFDKKGVI SYAPGLDEDV VMEVALESGA DDIETSEDGS IDVYTAPSDF
GLVKDALDAA GFEAENAEVS LIPSTKAELD VDTAPKLLRL IDALEDLDDV QEVYHNGDIS
DDVAASLE
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