| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003896 |
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| Symbol | |
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| ID | 8557631 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 2529887 |
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| End bp | 2531524 |
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| Gene Length | 1638 bp |
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| Protein Length | 545 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 646406993 |
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| Product | methyl-accepting chemotaxis protein |
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| Protein accession | YP_003286521 |
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| Protein GI | 262394667 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000288698 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCCAGA ACTTAACGAT CAAGCAGAAG ATAGTGATTC CGCTGTCACT GATTATTGGA
TTGTTTATTG TGAGCTCTGT ATTAAACGTT ATGACAAGTT GGAAACAATC TGAGTTGAGT
GAAACACTTA ACGAACAGAT AGTGCCGAAC TTATTAACGA TTGAGGATGC TTACCGCGAT
CTTTACCAAG CGACATCTGC AATCCAAGGT GTTGCTCTTT CTGATACTCA AACCGATATT
GACCACCACA TCGGTGAATA CAAAGACAAC GCATACAAAG CGCTGCCTCG TATGGAGAAA
ATGATTGAGC TATCGCAAGC TGGCGTGATG TCTTCTTCAC ACGGTAATGA AGTGAGAAAG
CTTGTCTCCC TAGGTGAAAA ATGGTTGGCG AGTTATGAAG CGATGTTGCG TTTACCTCAA
TCACAATGGC TTGGTTACTA CAACGAACAC AAACACACCT TTGAAAATCA GTTTATCGAG
GTAAGAGCGC AACTTAATGT TGTGAAAGAT GCGATAGAAG AAAAACAAAG CCTATTGAAA
GATGAAATCT CAGCAGCCGC AACAAGAGCT CAGGTAATTC TTGAAGCGGG CATTGTGATT
GTTATTCTGG CCGCTATTGC GATGGCGTTT TTGTTGTTGC AAACCGTCGT GAATCCTATC
AACGATATCA AAAATGCGAT GACAGAAATT GCTTCTGGTG AAGGTGATTT AAGCCAGCGA
ATCGATGTGA AAACACAAGA CGAAATTGGC AATTTAGCGA ACGCGTTTAA TCAGTTTGTG
TCTAAAATCC AAGCGACAGT TTCTCAAGTA ATTGAAAGTT CGAATACCTT GCGTAATGAG
ATGGAAAATC TTAGCTCGTT GACCACGACC ATCGCGAACT CGACCGTTTC ACAGCAAAAA
GACAGCGAGG CGGTAGCAGC GGCAGTGCAT GAGATGCAAG TCACCAGCAG AAATGTCAGC
GATAGCGCCA ACGAAGCTGC GGTTGCAAGC CAGACTGCGA ATGATGAACT TACCAATACC
AATGTTATTT TGGATCAAAC CGTTAGCTCA ATTCGTAGCC TCGCAAGTGA AATCGAAAGT
GCAAGCCACG TCATTAACAC ATTGGATCAT GATGTGAGTA ACATTGCTTC TGTATTGGAT
GTCATTCGTG GTATCGCAGA GCAAACGAAC TTATTGGCGC TTAACGCAGC GATTGAAGCG
GCTCGTGCAG GAGAACAAGG GCGAGGCTTT GCTGTTGTCG CAGATGAGGT CCGCTCGTTA
GCCAGTCGCA CACAACAGAG CACGGGTGAA ATCCAAACCA TGATTGAAAA GCTACAATCT
GGTGCGGGAC AAGCCGTAGA AGTGATGCGT GGTAGCCAAA ATAGCAGTGA TGAAACAATT
CAATCGGCAG GGAGAGCGAG TCAATCCCTT TCTGAAATCT TAAACGCGAT TTCACGTATG
AACGAGATGA ACACACACAT TGCAACGGCT GCAAGCCAGC AAAGTACGGT AAGTGACGAA
GTAAATAGCA ACGTACAAGG CATTGCAGAT AGCAGTACAT CTATTGTGGA AATCGTCAAC
CAAGCGCAAG CATCTTTAGC CATGTTATCA GAGCAAACCC AGCGTTTAGA TCATCAGGTT
AGTCAGTTCA AAGTATAA
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| Protein sequence | MFQNLTIKQK IVIPLSLIIG LFIVSSVLNV MTSWKQSELS ETLNEQIVPN LLTIEDAYRD
LYQATSAIQG VALSDTQTDI DHHIGEYKDN AYKALPRMEK MIELSQAGVM SSSHGNEVRK
LVSLGEKWLA SYEAMLRLPQ SQWLGYYNEH KHTFENQFIE VRAQLNVVKD AIEEKQSLLK
DEISAAATRA QVILEAGIVI VILAAIAMAF LLLQTVVNPI NDIKNAMTEI ASGEGDLSQR
IDVKTQDEIG NLANAFNQFV SKIQATVSQV IESSNTLRNE MENLSSLTTT IANSTVSQQK
DSEAVAAAVH EMQVTSRNVS DSANEAAVAS QTANDELTNT NVILDQTVSS IRSLASEIES
ASHVINTLDH DVSNIASVLD VIRGIAEQTN LLALNAAIEA ARAGEQGRGF AVVADEVRSL
ASRTQQSTGE IQTMIEKLQS GAGQAVEVMR GSQNSSDETI QSAGRASQSL SEILNAISRM
NEMNTHIATA ASQQSTVSDE VNSNVQGIAD SSTSIVEIVN QAQASLAMLS EQTQRLDHQV
SQFKV
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