Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_003880 |
Symbol | |
ID | 8557615 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | - |
Start bp | 2510963 |
End bp | 2511457 |
Gene Length | 495 bp |
Protein Length | 164 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 646406977 |
Product | leucine-responsive regulatory protein |
Protein accession | YP_003286505 |
Protein GI | 262394651 |
COG category | [K] Transcription |
COG ID | [COG1522] Transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000693258 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCAGACA ACTATAAAAA GCCGTCCAAG GAACTAGACC GTATCGACCG CAACATTCTT AATGAACTGC AGAAAGACGG TCGTATTTCA AACGTTGAGC TTTCAAAACG TGTGGGACTT TCTCCAACGC CATGTTTGGA GCGTGTACGT CGCTTAGAGC GTCAGGGTTA CATCACAGGA TACACTGCAT TATTGAATCC GCAGTTCCTG GATGCGTCAC TATTAGTATT CGTTGAGATT ACATTAAACC GTGGTGCGCC GGATGTATTT GAGCAGTTTA ACTCAGCTGT TCAAAAGCTA GACGACATAC AAGAGTGTCA TCTTGTATCA GGTGACTTTG ACTATCTTCT TAAAACCCGT GTATCAGATA TGGGTGCTTA CCGCCGACTA TTGGGCGATA CGTTACTACG TCTACCTGGC GTAAATGACA CTCGCACATA CGTTGTAATG GAAGAAGTGA AACAATCTAA CCAGCTTGTG ATCAAAACTC GTTAA
|
Protein sequence | MADNYKKPSK ELDRIDRNIL NELQKDGRIS NVELSKRVGL SPTPCLERVR RLERQGYITG YTALLNPQFL DASLLVFVEI TLNRGAPDVF EQFNSAVQKL DDIQECHLVS GDFDYLLKTR VSDMGAYRRL LGDTLLRLPG VNDTRTYVVM EEVKQSNQLV IKTR
|
| |