| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003869 |
|---|
| Symbol | |
|---|
| ID | 8557604 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013456 |
|---|
| Strand | - |
|---|
| Start bp | 2498236 |
|---|
| End bp | 2499042 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 646406966 |
|---|
| Product | biotin synthesis protein BioC |
|---|
| Protein accession | YP_003286494 |
|---|
| Protein GI | 262394640 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | [TIGR02072] biotin biosynthesis protein BioC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.19334 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATAATG CAGAGCAAAT GAAGTTGGAT TGCTTACTGC CTAATAAACA AGCGATCGCT
GCTTCCTTTA GTAAAGCAGC TAACACGTAC GACAAACATG CCGCTTTCCA GCGTGATGTC
GGCCATCGCT TACTAGACAA ACTTCCGAAT GACTTAACTC ATAAACGTGT TTTGGATTTA
GGATGTGGTA CGGGCTATTT TTCTCAACTT CTTCAAGAGC GTGGCGCTGA AGTGTTTTGT
GTGGACATCT CTCAAGAGAT GTTAAGCAAA GCTATGGTGC GCTGTGGCCA TGAACGAATG
AATTATGTGC TAGCCGACGC AGAAAACTTG CCTTTCGACG ATACAAGCTT CGACTACGTA
TTCTCTAGCT TGGCTTTGCA ATGGTGTGCC GATTTAAGTT ATCCCCTGAG AGAAGTTCGT
CGTGTACTAA AAGCTAATGG GAAGGCGGTT TTTTCTACCC TAGCTGAAGG GTCACTGTGC
GAGTTGCGAG CATCATGGAA AAAAATTGAT GCATATCAAC ACGTCAATAA CTTTCTATCG
CTCAATCAGG TAAAAATTGC GTTAGCGCAA TCTCGATGTG ACAACCATCA ACTAGACTTG
ACCACCATCA CAGTTTGGTA CGACTCAGCA TTTTCAGTTA TGCGTGACCT CAAAGGTATA
GGTGCAAATC ACGTAAGTGG GCGCTCACAT GGTTTAACCA GTCGAGAGAC TTTGTTGCAA
GTTGAGCATG AGTACCAAGC GTTTAAAAAT GATCAAGGTC TTCTACCTGC AAGTTATCAG
GTTTGTTTTG GAGTAATACA TCTATGA
|
|---|
| Protein sequence | MDNAEQMKLD CLLPNKQAIA ASFSKAANTY DKHAAFQRDV GHRLLDKLPN DLTHKRVLDL
GCGTGYFSQL LQERGAEVFC VDISQEMLSK AMVRCGHERM NYVLADAENL PFDDTSFDYV
FSSLALQWCA DLSYPLREVR RVLKANGKAV FSTLAEGSLC ELRASWKKID AYQHVNNFLS
LNQVKIALAQ SRCDNHQLDL TTITVWYDSA FSVMRDLKGI GANHVSGRSH GLTSRETLLQ
VEHEYQAFKN DQGLLPASYQ VCFGVIHL
|
|---|
| |