| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003824 |
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| Symbol | |
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| ID | 8557559 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 2454463 |
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| End bp | 2456202 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646406921 |
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| Product | alpha-1,6-galactosidase putative |
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| Protein accession | YP_003286449 |
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| Protein GI | 262394595 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3345] Alpha-galactosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.367398 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTCAGA GCATTCAATT GGCAAATCAC ATTGAGATCA CTGTGAATAA CAACGACCTC
CAAGTTGAAG TTGAGGGTAA TCAATTACAT TTTTCTTTTG CTGGGCTTCA CAATAAAACG
TTTACCGACC GTGAAGTGTT GTTCGAGATG CCGTTTTTAT ACGAGCACGA GGCCAATGTG
ATTGGCGATG GCTTCCAAAT GCTGGCGCAA ACAGCGGGAA CGGTTAGCTA TCCCGTTGAT
ATTGGTCGCT GTCCAGACAA CAACCCTTCT TATCGAATCT ATCCCAAAGA TGCCCCTAAG
CGTTACTACA ACTATTTAGT GGTGGAAGGC TCGGCTGGCT ATATCTTGTT TGGCTTTACT
TCATGTCACC GTTTTGCGGG CTATTTTGAT GTTGTACTGC GTGATGGACA TTGGGTTTTA
TCGGCCGCGA TTGATGGTGA GTTTACTCAA GTGGCGGATT GGGAAAGTAA TCAACTTGAA
TCCGTGGCGG TACTCTGCGG CCAATCTCTG TCTGAGCTTT ATCAAATCTA TGGAGAGATG
ATTGCAGAGC ATCATCCTGT TCGCCAAGGT GTGACACAAG ATGCGCCTGT CGGTTGGTGT
TCGTGGTATG CCTACTACGC AGACGTGACA GAGCAAAACA TCATGCAGAA CGTTGATTGC
ATGCAAGATA AGCTTGAAGA CCTAGAGTGG GTACTTCTGG ATGATGGCTA TCAAGCCTTT
ATGGGCGATT GGTTAATCCC ATCGGATAAG TTTTCTGGTG GTGTGAAAGA GCTCATTCAT
AGTATCCGTG CAAAAGGCAA AAAGCCGGCG ATTTGGATGG CCCCCTTTAT TGCTCAACCT
GAGTCGGAGA TCTTCAAACA ACACCCAGAG TGGTTTGTTC GTCACAAAGA TGGAAGCTTA
CTTAAAGCAG AAGATGTCAC ATACGGTGGT TGGCGCTGCA CGCCTTGGTA CATACTCGAT
ACCTCAAATC CAGAAGTGCA AGACCATCTG ACGAATGTGG TCTCTGTCAT GAGACAAGAG
TGGGGCGTTG AATTGTTCAA GCTAGACGCG AACTATTGGG GCACCTTGAA AGGTGTGCGT
AAACAGTCTG GTATTACCGG CGTTGAGGCG TATCGCTTAG GAATGGAAGC GATTGCTAAA
GGCGCTGGTG ATGCGTGGCT TTTAGGTTGC AACGCGCCAA TGTGGCCATC TCTAGGGCTT
GTGGATGCAA TGCGTGTTTC TGATGACGTA GAACGCCATA GTCGTCGTTT CGAGCAGATA
GCCAAAGAAA CCTTTTATCG TAGTTGGCAG CATCGAAAAC TGTGGCAAAT TGATCCGGAT
TGCGCGACAT TCACGTCATT AGCTAATCAA GCCGCATCCA GAGAAGAGTA TGAATTTCAT
CGCACGGTGT TATTGGCGTG TGGTGGTTTG CTGCTGTCTG GCGATCCGCT CCCTGAGATT
ACGCCATTTG CAAAGAAGAC ATTGGCTAAG CTCATGCTAC GTCAACAACG TAACCAAGAG
TCAGCAAAGT TCACGGCTTT GAGTTTAAAT CATGCGTTTT TAAAACTAAC GACGAAGAAT
GACCTTCACT GCTTGTTTAA CTATGCCAGC TACGGGGCGA TGGAATTTAC GCTGACGTCT
GATCAACCGA TGGATTGGTA TGATTACTGG ACAGGAGAAA AGCTAAACCA AGAACCTTGT
CAGTTATTAA TGGTTAGCGT TGATAAAGGG TTAAATGCGA AAGCGATCGT CACGGCATAA
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| Protein sequence | MAQSIQLANH IEITVNNNDL QVEVEGNQLH FSFAGLHNKT FTDREVLFEM PFLYEHEANV
IGDGFQMLAQ TAGTVSYPVD IGRCPDNNPS YRIYPKDAPK RYYNYLVVEG SAGYILFGFT
SCHRFAGYFD VVLRDGHWVL SAAIDGEFTQ VADWESNQLE SVAVLCGQSL SELYQIYGEM
IAEHHPVRQG VTQDAPVGWC SWYAYYADVT EQNIMQNVDC MQDKLEDLEW VLLDDGYQAF
MGDWLIPSDK FSGGVKELIH SIRAKGKKPA IWMAPFIAQP ESEIFKQHPE WFVRHKDGSL
LKAEDVTYGG WRCTPWYILD TSNPEVQDHL TNVVSVMRQE WGVELFKLDA NYWGTLKGVR
KQSGITGVEA YRLGMEAIAK GAGDAWLLGC NAPMWPSLGL VDAMRVSDDV ERHSRRFEQI
AKETFYRSWQ HRKLWQIDPD CATFTSLANQ AASREEYEFH RTVLLACGGL LLSGDPLPEI
TPFAKKTLAK LMLRQQRNQE SAKFTALSLN HAFLKLTTKN DLHCLFNYAS YGAMEFTLTS
DQPMDWYDYW TGEKLNQEPC QLLMVSVDKG LNAKAIVTA
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