| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003819 |
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| Symbol | |
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| ID | 8557554 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 2449755 |
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| End bp | 2450750 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646406916 |
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| Product | peptide transport system ATP-binding protein SapD |
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| Protein accession | YP_003286444 |
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| Protein GI | 262394590 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG4170] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.41976 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGTTGT TAGATATTCG ACATTTGACT ATTGAGATTG AAACCCCTCA AGGGTTGGTC
AAAGCCGTGG ACCGAATGAG CCTAACTTTG AATGAAGGTG AGATTCGTGG TCTTGTAGGT
GAGTCTGGTT CAGGGAAAAG CTTAGTTGCA AAAGCGATTG TCGGGGTAAG TAAAGATAAC
TGGCGCATTA CCGCGGACCG TATGCGCCTT GGCAATATTG ACTTGCTTCA GCTTACGCCA
AAAGAGCGTC GGCGCGTCAT TGCTCGTGAT ATTGCGATGA TTTTCCAAGA GCCTTCAACT
TGTCTTGACC CTTCAGAAGA AGTGGGACGT CAATTGATCG AGTCCATTCC ATCTCGTGCG
TTTGAAGGGA AATGGTGGGA GCGATTTAAA TGGCGTAAAA AACAGGCCAT CGCGCTTCTG
CATAAAGTAG GCATTAAAGA TCACAAGCGT TTAATGGGTA GCTATCCTTA TGAACTGACC
GATGGTGAGT GTCAAAAAGT CATGATTGCC ATGGCGATAG CGACCAAACC AAAGTTGCTG
ATCGCAGATG AACCAACCAA CGACTTAGAC CCGATTACCC AATCGCAAAT ATTGCGTTTA
TTGAGCCGTA TGAACCAGCT CAATAACACG ACCATTCTGC TTATCGGTCA CGACTTAGCG
ACCATCACAC AATGGGCGGG CCGCATTACG GTAATGTATT GTGGTCAGTC GGTAGAGTCT
GCCGATACCA GTAAAATCAT TGCGGCACCC AAGCACCCGT ATACAGATGC CTTGCTTAAA
GCGATGCCAG ACTTTAATGA TTGGGTACCA CACAAGCAAA AACTCCAATC CCTACCGGGA
TCGATTCCGC CATTGCAGCA TCTGCCCATC GGTTGTCGAC TCGGTCCACG TTGCCCGTAT
GCGCAGAAAC AATGTGTTGA AATTCCACAC ACCAGACGAA TTAAGAATCA TAAATTTAAC
TGCCACTTTC CATTGAACAC GGAGAAAAAG TCATGA
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| Protein sequence | MPLLDIRHLT IEIETPQGLV KAVDRMSLTL NEGEIRGLVG ESGSGKSLVA KAIVGVSKDN
WRITADRMRL GNIDLLQLTP KERRRVIARD IAMIFQEPST CLDPSEEVGR QLIESIPSRA
FEGKWWERFK WRKKQAIALL HKVGIKDHKR LMGSYPYELT DGECQKVMIA MAIATKPKLL
IADEPTNDLD PITQSQILRL LSRMNQLNNT TILLIGHDLA TITQWAGRIT VMYCGQSVES
ADTSKIIAAP KHPYTDALLK AMPDFNDWVP HKQKLQSLPG SIPPLQHLPI GCRLGPRCPY
AQKQCVEIPH TRRIKNHKFN CHFPLNTEKK S
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