Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_003805 |
Symbol | |
ID | 8557540 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | + |
Start bp | 2434253 |
End bp | 2435461 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 646406902 |
Product | cystathionine beta-lyase |
Protein accession | YP_003286430 |
Protein GI | 262394576 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
TIGRFAM ID | [TIGR01324] cystathionine beta-lyase, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.227747 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAGAGG GCAAAAAAAC CAAGCTCATT ACCGCTGGCC GCGATAAAAA GTGGACAAAC GGTGTTGTAA ACCCACCCGT TCAACGCGCT TCAACCGTGG TATTCAACAC GGTTGCAGAG AAGAACCAAG CCACCATGAA CCGTACCAAT AAAACATTAT TTTATGGTCG CCGTGGCACT AACACGCACT TCGCTTTTCA AGATGCAATG GTTGAGATTG AAGGTGGAGC AGGTTGTGCT CTCTACCCTT GTGGGACGGC AGCAATTTCA AATGCGATTC TCTCTTTCGT CGAAACTGGC GATCACATTC TGATGGTGGA CACTTGTTAC GAACCAACTC GTGATTTTTG TAATATCATC ATGAAGAAAA TGGGCATCGA AACTACCTAT TATGATCCGA TGATTGGAGA AGGTATTCGT GATTTGATTC AACCAAATAC CAAAGTCCTT TTCCTAGAAT CTCCGGGGTC AGTCACAATG GAGGTGCAGG ACGTACCAAC ATTGGCGCGC ATTGCTCATA AGCACGATAT TATTGTGATG CTTGATAACA CATGGGGAGC TGGCGTGAAC TTCTCACCAT TTGAACATGG TGTCGATATT TCCATTCAAG CCGCCACCAA ATACATAGTT GGTCACTCTG ATGTAATGTT AGGTACAGCC GTAGCTTCCG AAAAATACTG GCCCCAACTG CGTGAACAAA GCTACTTGAT GGGTCAGTGC GTTTCTCCTG ACGACGCATA CCTAGGCCTT CGTGGTATTC GCACGCTGGA TGTTCGCCTA AGACAACACG CAGAAAGTAG CTTGAAAGTC GCCAAGTGGC TGACTTCTCG TCCGGAAGTT GATCATGTCC GCCACCCAGC ATTGGAATCG TGCCCTGGCC ATGAGTTTTT CAAACGTGAC TTCACTGGTG GAAACGGCTT GTTTTCATTT GTTCTCAAAA CGTCTTATCC AAAAGCGACG ACGGCTCTGC TTGACGGTAT GAAACACTTC AGTATGGGTT ATTCTTGGGG CGGGTATGAA AGCCTCATTC TAGCTAACGA ACCAAAGAGC TTTAACAACT TGAGAACCGT AGCGCACCCA TACTTTGAGG GCACTTTAGT TCGAATTCAT ATTGGCTTAG AAGACGTGGA TGACTTGATC GCCGATCTAG AGGCTGGTTT TGCACGCTAT AACGCGTTAA TTTTAGAAAA AGAAGTCTCT CTAAAATAG
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Protein sequence | MSEGKKTKLI TAGRDKKWTN GVVNPPVQRA STVVFNTVAE KNQATMNRTN KTLFYGRRGT NTHFAFQDAM VEIEGGAGCA LYPCGTAAIS NAILSFVETG DHILMVDTCY EPTRDFCNII MKKMGIETTY YDPMIGEGIR DLIQPNTKVL FLESPGSVTM EVQDVPTLAR IAHKHDIIVM LDNTWGAGVN FSPFEHGVDI SIQAATKYIV GHSDVMLGTA VASEKYWPQL REQSYLMGQC VSPDDAYLGL RGIRTLDVRL RQHAESSLKV AKWLTSRPEV DHVRHPALES CPGHEFFKRD FTGGNGLFSF VLKTSYPKAT TALLDGMKHF SMGYSWGGYE SLILANEPKS FNNLRTVAHP YFEGTLVRIH IGLEDVDDLI ADLEAGFARY NALILEKEVS LK
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