| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003793 |
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| Symbol | |
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| ID | 8557528 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 2419511 |
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| End bp | 2420671 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646406890 |
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| Product | ABC transporter substrate-binding protein YnjB |
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| Protein accession | YP_003286418 |
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| Protein GI | 262394564 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4134] ABC-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000277117 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGC TACTCAGTAC CGTTGGCATT TTAGCCACCA CTTTCGCGAC ATCTTCTTTT
GCCAACTCAT CGGTTGCTAG TGAATGGCAA AAAATCGAAC AACAAGCCGA CGGACAATCC
GTCTATTTTC ATGCTTGGGG TGGTAGCCAA GAGATCAACC GCTATATCCA ATGGGCAGGC
AAAGAGCTTA AATCTCGCTA CAACGTGACG CTAAATCACG TGAAAGTCAC TGATATTTCT
GAAACCACAA CTCGCCTAAT CGCAGAAAAA GCCGCGGGCA AAAACAGCGG TGGCAGTGTT
GATATGGTTT GGATCAATGG CGAAAACTTC AAATCAATGA AGGATAACCA ATTGCTGTTT
GGTCCTTTTG TTGAAGGCTT GCCAAGCTGG CAGTACGTTG ATAAATCATT GCCAATTGAT
GTGGATTTTT CAGAGCCAAC TGAAGGTCTG GAAGCACCTT GGGGTGTGGG GCAATTAGTG
TTTATTCATG ATGAGCAAAC CCTGCATAAC CCTCCTCGAT CTTTTGCTGA AATGCTGAGT
TACGCAAAAG CGTTTCCAAA TCGCCTAACT TACCCTCGCC CACCAGAGTT TCATGGGACA
AGCTTTATTA AAGCACTGTT GATTGAGTTG ACCAACAACG ATCCCGCTTT GCAAAAACCA
GTCACTGGTG AAACATTTGA GCAAATCACT CAACCGCTGT GGGCTTACCT AGATGAGTTC
CATAAAGTTG CTTGGCGTGG CGGTAAGCAA TTCCCAGGAG GGACGGCTGA AACGCTTCAA
TTACTGGATG ATGGTCAGAT TGATCTTGCG ATTACCTTTA ACCCAAACGC GGTTTTCTCT
GCACAATCAA GTGGTAATCT TGCAGACAGC ACCAAAGCGT ATGCGATGGA CGCAGGTGCA
CTCTCAAACA TTCACTTCTT AGCGATTCCT TGGAACGCAA ATGCCAGTGC CGGTGCGCAA
GTTGCGATAA ACTTTTTATT GAACCCTGAA GCACAGTCTC GCAAAGGTAA CCTAAACATC
TGGGGCGATC CTTCAGTGCT AAGCAGCCAA TACCTAACAG GTTCGGCTAA AAATACTCAA
CAATTCAAAT CTATCGCTGA GCCGCATCCG AGTTGGCAAT CTGCCTTAGA AAAAGAATGG
TTGAAACGCT ACGGGAATTA A
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| Protein sequence | MKKLLSTVGI LATTFATSSF ANSSVASEWQ KIEQQADGQS VYFHAWGGSQ EINRYIQWAG
KELKSRYNVT LNHVKVTDIS ETTTRLIAEK AAGKNSGGSV DMVWINGENF KSMKDNQLLF
GPFVEGLPSW QYVDKSLPID VDFSEPTEGL EAPWGVGQLV FIHDEQTLHN PPRSFAEMLS
YAKAFPNRLT YPRPPEFHGT SFIKALLIEL TNNDPALQKP VTGETFEQIT QPLWAYLDEF
HKVAWRGGKQ FPGGTAETLQ LLDDGQIDLA ITFNPNAVFS AQSSGNLADS TKAYAMDAGA
LSNIHFLAIP WNANASAGAQ VAINFLLNPE AQSRKGNLNI WGDPSVLSSQ YLTGSAKNTQ
QFKSIAEPHP SWQSALEKEW LKRYGN
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