Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_003734 |
Symbol | |
ID | 8557469 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | - |
Start bp | 2348160 |
End bp | 2349833 |
Gene Length | 1674 bp |
Protein Length | 557 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 646406831 |
Product | putative alkaline phosphatase |
Protein accession | YP_003286359 |
Protein GI | 262394505 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3540] Phosphodiesterase/alkaline phosphatase D |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.139476 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCTTTGT CTCGTCGAGA CTTTATGAAA GCTGCCTCTT CAACGGCGAT TGTTACCGGG CTGGTGGGCT GTGGTAGCGA TGCTAGTGAA TCTGTTGCGG TTACCTTTGA GCACGGAGTG GCGAGTGGAG ATCCTACTCA AACACAAGTA ATCATTTGGA CTCGTGTTAC GACCTCAGCA AGCTACGCAG ATGTAAGCTG GCAAGTTTCA TCTAACGAAA ATTTTACTGA TATCGTGCAA AGTGGCACTT TTGCCACAGA CACGAGCCGA GATTTCACGG TAAAAGTCGA TGTTCAAAAT CTCAACGCAA ATTCTCGCTA CTACTATCGA TTCATGGTTG GAGATGTCAC TAGCGAAGTC GGGCAAACTC AAACATTACC AGAGGATGGT GTAGAAAAGG CATCCATGGC TGTTGTTTCT TGTGCAAACT ATCCTGCAGG CTATTTCCAT GTGTATCGAG AGATCTTAAA TCAACATGAA CAAGACCCGT TTGATGTGGT GCTTCATCTC GGTGATTACA TTTATGAGTA TGGTGCTGGT GGCTACGCTA GTGAAGATGC TGAGGCACTA GGGCGAGAGC CAAGCAAAGG CACTGAATGT ATTACCTTAG ATGATTACCG AAAACGGTAT GCGCAATATC GCCAAGATGC TGATCTGCAA GCGTTACATG CGAGCCTACC AATGATTGCT GTCTGGGATG ACCATGAGCT TGCAAATGAT ACTTGGAAAA ATGGTGCGGA AAACCATCAA GAAGAGGAAG GCAGCTTTAA TGATCGTCGT GCAGCTGCGG CTGCCGCGTG GACAGAATGG TTGCCCGTTC GTGAAAACAC TTTCTCAAAC ATGCTGATTT ACCGTCAGTT TTCGTTTGGA AGTTTAGTCA ATTTGATGAT GCTCGACACG CGACTTGTGG GACGTGATAA ACCGTTGGAT TACTTCTCGC TCAGCTCTCC AAAGATGGAA GCTATTGGCG GTTTAGTTGC TCAGTCGCGC AGTGAAGACC GAGAGCTGTT AGGCGCTGAC CAACTCGCTT GGCTGATGGA TGCGTTCAGT ACGCACGACG CAACTTGGAA TGTGCTAGGG CAACAAGTGT TAATGTCTCG TATGGAGCTG CCAAGTTCGG TGATGACCGC TATGTTTCAA TTGTTTACTG CCACTGAAGA CCAAAAAACA GAGGCGTTAT TAGCGGTAAA CTCTGCGATT ACGGGTTATC TCTTTGACCC AAGTTTAGAT ACCATTGCTT TGCCATATAA CCTAGATGCA TGGGATGGTT ACTACGTTGA GCGAGAGAAA GTTTATCAAC TGGCCAAAGC CAGCAGTGGT AACTTTGTCT GCTTGGCAGG AGATACGCAC AACGCATGGG CAAGTGAGCT TAAAGACGTA TCTAAGCATC CTATCGGGAT AGAGTTTGCA ACTAGCTCGG TGAGTTCCCC TGGGCTAGAG GCCTACCTAG CGTTAGATCC TGTTGCGATC GCTCAAATGG AATACACGTT GCCGCACTTA GTGTCAGAAT TACAGTGGGC AGACATCAAA CAGCGTGGCT TTATGCGCGT TACTTTTACG CCCGACAAGG CAGAGTCGAC CTGGTATTTC GTATCAACGA TTAAAGACAA AACATATCAG GTGACGACTA AGTCAGCCTC TACAACAGAT GGCACTACGT TAAATATCGG CTAA
|
Protein sequence | MSLSRRDFMK AASSTAIVTG LVGCGSDASE SVAVTFEHGV ASGDPTQTQV IIWTRVTTSA SYADVSWQVS SNENFTDIVQ SGTFATDTSR DFTVKVDVQN LNANSRYYYR FMVGDVTSEV GQTQTLPEDG VEKASMAVVS CANYPAGYFH VYREILNQHE QDPFDVVLHL GDYIYEYGAG GYASEDAEAL GREPSKGTEC ITLDDYRKRY AQYRQDADLQ ALHASLPMIA VWDDHELAND TWKNGAENHQ EEEGSFNDRR AAAAAAWTEW LPVRENTFSN MLIYRQFSFG SLVNLMMLDT RLVGRDKPLD YFSLSSPKME AIGGLVAQSR SEDRELLGAD QLAWLMDAFS THDATWNVLG QQVLMSRMEL PSSVMTAMFQ LFTATEDQKT EALLAVNSAI TGYLFDPSLD TIALPYNLDA WDGYYVEREK VYQLAKASSG NFVCLAGDTH NAWASELKDV SKHPIGIEFA TSSVSSPGLE AYLALDPVAI AQMEYTLPHL VSELQWADIK QRGFMRVTFT PDKAESTWYF VSTIKDKTYQ VTTKSASTTD GTTLNIG
|
| |