Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_003688 |
Symbol | |
ID | 8557423 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | - |
Start bp | 2295937 |
End bp | 2296965 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 646406785 |
Product | succinylglutamate desuccinylase |
Protein accession | YP_003286313 |
Protein GI | 262394459 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2988] Succinylglutamate desuccinylase |
TIGRFAM ID | [TIGR03242] succinylglutamate desuccinylase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGAAGT CTCTCTTTCG CCAATCGTTT TTAACTGACA CGTTAGATGT TCATATCGAT GTTGCACCAG CGGAGCAGGT GCTTTCTAAC GGTGTAAAAC TTAAACTCTA TCAGCGTGGT GTACTAGAAG TGATCCCTGA GAACTATACT CAGGATACGA AGAACGTCAT CATCTCTTGT GGGGTTCACG GAGATGAAAC GGCACCGATG GAGCTGGTGG ATTCCATTAT TCAAGACATA GAATCTGGGT TCCAGACGGT CGATACCCGT TGTCTGTTCA TTATCGCTCA CCCAGAATCC ACTCTGGCGC ACACGCGATT CCTTGAAGAA AACCTCAACC GTCTTTTTGA CGAAAAAGAA CACAAGCAGA CAAAAGAGCT TGTCATCGCT GATACACTAA AGTTGCTCGT TCGCGATTTC TATCAAGATA CCGACCCGAC AACACGCTGG CATCTTGATT TGCACTGCGC GATTAGAGGT TCGAAGCACT ATACGTTTGC AGTAAGTCCT AAGACTCGTC ATCCTGTGCG AAGCAAGGCA TTAATCGATT TCTTGGACAG TGCACACATT GAAGCTGTGC TCTTATCAAA CTCACCATCG AGTACGTTTA GCTGGTACAG TGCCGAGAAC TTTGGTGCGC AAGCTCTCAC AATGGAGCTT GGTCGTGTGG CTCGTATTGG TGAAAATGAC CTCGATAAAT TGACTGCGTT TGATTTGTCT TTACGTAATT TGATTGCGGA AACGAAGCCA GAACACCTAC CAAAACCATG CATTAAATAT CGCGTAAGTC GCACAATCGT TCGACTGAAC GAAGACTTTG ACTTTATGTT CGACGACAAT GTTGAAAACT TCACTTCATT TGTTCACGGC GAAGTGTTTG GTCATGATGG CGACAAACCA TTAATGGCGA AGAACGAAAA CGAAGCGATT GTCTTCCCGA ACCGCCATGT CGCAATAGGT CAACGTGCAG CTCTGATGGT TTGTGAAGTG AAAACCCGTT TTGAAGAGGG TGAGTTGGTT TACGATTAA
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Protein sequence | MTKSLFRQSF LTDTLDVHID VAPAEQVLSN GVKLKLYQRG VLEVIPENYT QDTKNVIISC GVHGDETAPM ELVDSIIQDI ESGFQTVDTR CLFIIAHPES TLAHTRFLEE NLNRLFDEKE HKQTKELVIA DTLKLLVRDF YQDTDPTTRW HLDLHCAIRG SKHYTFAVSP KTRHPVRSKA LIDFLDSAHI EAVLLSNSPS STFSWYSAEN FGAQALTMEL GRVARIGEND LDKLTAFDLS LRNLIAETKP EHLPKPCIKY RVSRTIVRLN EDFDFMFDDN VENFTSFVHG EVFGHDGDKP LMAKNENEAI VFPNRHVAIG QRAALMVCEV KTRFEEGELV YD
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