| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003661 |
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| Symbol | |
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| ID | 8557396 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 2266670 |
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| End bp | 2267662 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646406758 |
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| Product | oligopeptide transport ATP-binding protein OppF |
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| Protein accession | YP_003286286 |
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| Protein GI | 262394432 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4608] ABC-type oligopeptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAAAA AAGAAGTCCT CATGTCTGCT CGTGATTTAA ACGTCCACTT TCCAGTGTCG
CGTCACCTTA TTCCAAGTCG ACGTAAAATC GTGAAAGCGG TCAATGGTAT CGACTTAGAT
GTTTATCGAG GTGAAACACT TGGCATTGTG GGGGAATCGG GCTGCGGAAA ATCAACGCTT
GCACGCGCCT TACTTCGCTT AATTGATCCT ACACATGGCG AGTTGACTTG GAAAGGTCAA
GACATGCTCG GGTTTAGTAA AAAAGAGCTT TCCTCTCGAC GTAGAGAATT TCAGATGGTG
TTTCAAGACC CATCCGCTTG TTTGAATCCG AGATTAACCA TCTCAGAATG CATCGCCGAA
CCACTGCTCA CCCATGAGCC ACAACTTAAA CGAGCAGAGG TAGAAAAGCG CGTCATCGCT
ATGATGGATA AAGTGGGTCT CTTGGCGAGC CAGCGAAACC GCTATCCACA TGAATTTTCC
GGAGGTCAAT GCCAGCGTGT GGGCATTGCT AGAGCGTTAA TTCTCAATCC AGATTTGGTC
GTGTGTGATG AACCCGTTAG TGCGCTAGAT GTCTCCATAC AAGCTCAGGT CATCAATCTT
CTAGATGATC TTAAACAAGA AATGGGGTTA ACACTGGTAA TGATTGCGCA CGACTTAAGC
GTGGTGCGCC ACATCAGCGA CCGCGTTATG GTGATGTATC TTGGTAAACC TATGGAAGTA
GGACGTTACG ATAAAGTATT TGATGATGCT CAACACCCCT ACACCAAAGC ACTGTTATCC
GCCGTCCCGA TAGCTAATCC GCAATTAGCA CGTGACCGTG AAATACAACT ATTGCCCGGT
GATCTCCCGT CTCCACTTAA TCCACCGAGC GGTTGCGTTT TTCGTACTCG ATGTCCAGAA
GCCACAGAAG TATGCGGGCA ACAGAACCCA ATAAAAACAG GCTCGGATCA GCATCATATC
TATTGCTCAA ATATGACTTT AGGAACCATT TAA
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| Protein sequence | MNKKEVLMSA RDLNVHFPVS RHLIPSRRKI VKAVNGIDLD VYRGETLGIV GESGCGKSTL
ARALLRLIDP THGELTWKGQ DMLGFSKKEL SSRRREFQMV FQDPSACLNP RLTISECIAE
PLLTHEPQLK RAEVEKRVIA MMDKVGLLAS QRNRYPHEFS GGQCQRVGIA RALILNPDLV
VCDEPVSALD VSIQAQVINL LDDLKQEMGL TLVMIAHDLS VVRHISDRVM VMYLGKPMEV
GRYDKVFDDA QHPYTKALLS AVPIANPQLA RDREIQLLPG DLPSPLNPPS GCVFRTRCPE
ATEVCGQQNP IKTGSDQHHI YCSNMTLGTI
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