| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003659 |
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| Symbol | |
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| ID | 8557394 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 2264735 |
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| End bp | 2265667 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646406756 |
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| Product | oligopeptide transport system permease protein OppC |
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| Protein accession | YP_003286284 |
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| Protein GI | 262394430 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAACGA TCAAAAAACT GGATACACAA GCTCTTCAAG ATCAAGTCGT CGACAATATT
GAAGCCGTCG AAGGTCGCAG TCTTTGGCAG GATGCATGGA CTCGATTTCG TAAAAACAGA
GCCGCGATGA CATCAGTGTA TGTTTTGGCG TTCATTACCT TATGCATCAC TTTCGGCCCC
TCTCTTGCCG CTTTTGGCCA TGATGAAATT GACTGGGAAG TGCTCATCGA TCCATACGAG
CTAGGAAAAC CTTCACTGAG CAGTGGTCAT TACTTTGGTA CCGATGATCT CGGGCAAGAT
GTCTTTGCTC GCACGATGCA AGGCGGCAGG CTCTCTATTT TGGTAGGTTT TGTTGGCGCC
TTAGTCGCCG TTGTTATTGG TACGATTTGG GGAAGTATTT CCGGCTATCT TGGCGGCGTT
GTCGATAGCG TAATGATGCG CATTATTGAG GTGCTCGATT CGGTGCCATT TATGTTTATG
GTTATCCTGT TTGTTACCCT TTTTGGCAAC AACATCTATC TGATCTTTAT TGTGATCGGA
ATGGTATCTT GGTTAGGCAT TGCCCGTGTT GTACGTGGTG TCACCTTCGG TCTCAAAAAG
CGAGAATTCA TCGAAGCCGC ACACTCTATT GGGGTTTCTA AATTGACAAT TGTCCGACGC
CATGTTCTGC CTAATGTGCT TGGTATCGTG ATGGTTTATT CCTCCTTAAT GGTGCCTGGA
TTCATTATGT TCGAATCGTT TTTAAGCTTC TTAGGGCTTG GTGTTCAACC ACCGGATACA
AGCTGGGGAA TCCTAATCTC CGAAGGCGCA AAAACGATTG ACGTTGCATT GTGGATGCTG
CTTTTTCCCT CTCTGTTTTT AGTTGCCACC CTCTTTTGTT TTAACTTCAT CGGCGATGGC
TTGCGTGATG CTCTTGACCC GAAAGACCGA TAA
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| Protein sequence | MLTIKKLDTQ ALQDQVVDNI EAVEGRSLWQ DAWTRFRKNR AAMTSVYVLA FITLCITFGP
SLAAFGHDEI DWEVLIDPYE LGKPSLSSGH YFGTDDLGQD VFARTMQGGR LSILVGFVGA
LVAVVIGTIW GSISGYLGGV VDSVMMRIIE VLDSVPFMFM VILFVTLFGN NIYLIFIVIG
MVSWLGIARV VRGVTFGLKK REFIEAAHSI GVSKLTIVRR HVLPNVLGIV MVYSSLMVPG
FIMFESFLSF LGLGVQPPDT SWGILISEGA KTIDVALWML LFPSLFLVAT LFCFNFIGDG
LRDALDPKDR
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