Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_003657 |
Symbol | |
ID | 8557392 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | + |
Start bp | 2262050 |
End bp | 2263660 |
Gene Length | 1611 bp |
Protein Length | 536 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 646406754 |
Product | oligopeptide ABC transporter periplasmic oligopeptide-binding protein OppA |
Protein accession | YP_003286282 |
Protein GI | 262394428 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTAC CTAAGTTGCT TTTATTAGCG TCGATGATGA GTCCAATACT GGCAACACCA AGCTATGCCG CGCCGCATCC CGCAGGTGTG ACCCTCGATG AGACACAAGA AATTACGCTA AACAATGGGG CTGAAGTTAC TTCTATTGAC CCAGCCAAGC AAGCCGCAGA GCCCGCTTTT AATCTCGGTC GAGACCTATT TGAAGGCCTG GTCATTCAAG ATAAGCAAGG TAAAACCATT CCTGGTGTTG CTGAGTCTTG GTCAGTCAAT GACAACAATA CGGTTTATAC CTTCCACTTA CGTGATGCAA AATGGTCAAA TGGCGAAACG GTCACTGCGC AAGATTTTGT CTACAGCTGG CAACGCTTAC TGAATCCGAG CACTGCTTCA CCGTACGCTT GGTTTGCGGC CATTCCAAAT ATCGCAAACT CACAAGCCAT TATGAAAGGC GAAGCAGAAC CCGAGTCTTT GGGCGTGAAG GCGCTGGATG AAACAACGTT CCAGGTAACA CTCGAAGAGC CGATTCCCTT CTTTACGAAA CTATTAAGTC ATCCAGTGCT TGCACCCGTT CATAAAGCGA CCGTTGAAAA ACATGGCAAC CGTTGGACCC AGCCTGAGCA TATCGTTACA AATGGGGCGT TTACTGTCTC TGAATGGAAA GTTAACGAAA AACTAGTGAT GGTTAAAAAC CCACATTATT GGGACGCAAG CAATGTAGTG CTGGAAAAAG TCACCTGGCT ACCAATTGGT GATGCAAATG TAGTGCTAAA CCGCTACCTA GCCGGTGAGA TAGACCAAGC GGTTTCCATT CCTGCCGCTC AGAAGAAAAA GCTAATTCAA CAGCGCCCAC AAGAAGTGGC AAGCACCAGT GCGTCTCTTG GCTCCACATT CTATTACCTC AACACTCAAC AAGGGCCAAC AAAAGACGTG CGGGTCCGTA AAGCCCTCTC ATATGCCATT GACCGTCAAC TGTTAACGAG TGCTATCTTG AGAAACGGTG GGGTTCCAAT GTATACCCTT GTGCCCCCTC AAACAGATGG TTTTAAATCT CACACTCCTG AGTTCGCAAC TTGGAACCGC CATAAACGTA TCGAAAAAGC GCAGCAATTA CTGTCAGAAG CTGGATACGA TAAAAGCAAT CCGCTTAAGT TAACGTTTAC CGTACCAACT TTCTCGATGG ACGTAAAAAT GGCAACAACC ATGGCAGGCA TGTGGAAAAG CCGATTGGGT GCGCAAGTCA CGATAAAGCA GCTAGAACCG AAAGTGTTCT ACGCACTTAA AGAGCCGACC GACATTACTC GCGGCGGCTG GACGGCCGAC TACAATGAAG CCTCTACATG GTTGGATATC TTCGTTTCTA GTGGCGAGTA CAACGATTCT CGTTATAACA ACCCGCAATA CGACGAGTTA ATGGCTCGTT CAAAGACCAT GAGCAATCCA TCAGAACTGT ATCTACAAGC AGAAAGCATG CTGATTGAAG ACATGGCCAT TATTCCTATT TATCGTCCGG GTAACGATCA ATACCTCATC AAGCCTTATG TGGGCGGCTA CGAACTGACA AACCCTGAGT CTTCGTATTA CCGCAAGAAT GTCTATGTGA AAGCCCACTA A
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Protein sequence | MKLPKLLLLA SMMSPILATP SYAAPHPAGV TLDETQEITL NNGAEVTSID PAKQAAEPAF NLGRDLFEGL VIQDKQGKTI PGVAESWSVN DNNTVYTFHL RDAKWSNGET VTAQDFVYSW QRLLNPSTAS PYAWFAAIPN IANSQAIMKG EAEPESLGVK ALDETTFQVT LEEPIPFFTK LLSHPVLAPV HKATVEKHGN RWTQPEHIVT NGAFTVSEWK VNEKLVMVKN PHYWDASNVV LEKVTWLPIG DANVVLNRYL AGEIDQAVSI PAAQKKKLIQ QRPQEVASTS ASLGSTFYYL NTQQGPTKDV RVRKALSYAI DRQLLTSAIL RNGGVPMYTL VPPQTDGFKS HTPEFATWNR HKRIEKAQQL LSEAGYDKSN PLKLTFTVPT FSMDVKMATT MAGMWKSRLG AQVTIKQLEP KVFYALKEPT DITRGGWTAD YNEASTWLDI FVSSGEYNDS RYNNPQYDEL MARSKTMSNP SELYLQAESM LIEDMAIIPI YRPGNDQYLI KPYVGGYELT NPESSYYRKN VYVKAH
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