| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003545 |
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| Symbol | |
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| ID | 8557278 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 2132452 |
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| End bp | 2134032 |
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| Gene Length | 1581 bp |
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| Protein Length | 526 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 646406640 |
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| Product | choline-glycine betaine transporter |
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| Protein accession | YP_003286170 |
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| Protein GI | 262394316 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAATG CATTTAAAAA ATATAGTATC GACACAACAG ACTATCAGGT TGGACAGGAC
AACGTTCAAA AGTGGGGATT CGACATACAT AACCCCGTTT TTGGCATCAG TGCGGGTCTC
GTTGTTTTTT GTCTAATTTC ACTTCTTCTT GTTGAGCCAA CCACTGCTCG TGATGTATTA
AACGGTCTGA AAAACGGAAT TATCGAACAG TTTGATGCGT TCTTTATGTG GTCGACAAAC
TTCTTCTTAT TATTCGCTGT TGCTCTTCTT TTTTCTCCGT TGGGTAAAAT CCGCTTAGGT
GGCAAAGAAG CAACGCCGGA TCACTCAACC GTTTCTTGGT TGTCGATGCT CTTTGCAGCT
GGTATGGGTA TTGGTCTTCT GTTCTGGAGT GTGGCGGAGC CGACCGCGTA CTTCACTGAT
TGGTGGGGAA TGCCACTGAA CGCAGTGCCA TACACAGAAG AAGCGAAATC TCTAGCGATG
GGTGCCACCA TGTTCCACTG GGGTGTGCAT GGTTGGAGTA TTTACGCACT CGTTGCACTA
GCACTTGCGT TTTTTGCTTT TAACAAGGGT TTACCGCTTT CATTGCGCGC GGCGTTTTAT
CCAATTTTTG GTGACCGAGC ATGGGGTTGG TTAGGACATG TTATCGACAT TCTTGCCGTT
TTATCCACGC TGTTTGGTCT TGCAACGTCG CTGGGTCTCG GTGCTCAGCA GGCGACCAGT
GGTATTAACC ATGTCTTTGG TCTAGAAGGC GGCATTGGTA CACAAATGAT TGTGATCATC
TTTGTTACCT TTATCGCGGT GCTATCAGTA ATTCGTGGTA TTGATGGTGG TGTTAAACTA
CTGAGTAACG TCAATATGGT GGTTGCATTT GCCCTGCTTA TTTTCATTAC CTTTATCACG
TTTGATACGG CGTGGGGTTC GCTACGCGAC ACAACAATGG CTTACATTGA AAATATTATT
CCGTTGAGCA ACCCCCACGG TCGTGAAGAT GAAACTTGGA TGCACGGCTG GACGGTATTC
TACTGGGCTT GGTGGGTATC TTGGTCACCG TTTGTTGGTA TGTTTATCGC GCGTGTGTCT
AAAGGTCGTA CGGTTCGAGA ATTCCTGTTC GCAGTGATCG TTATTCCTAC TGTCGTTACC
TTGATTTGGA TGTCTGTATT CGGTGGTATC GCGCTTGACC AAGTGGTGAA TAAAGTCGGT
GAGCTAGGTG CAAATGGTCT AACTGATATT TCATTGACTC TGTTCCATGT TTACGATGCG
CTTCCGTATA GCTCAGTGAT TTCAATGCTT TCTATCGTGC TGATTCTGGT GTTCTTTATT
ACATCATCAG ACTCTGGCTC ACTGGTTATC GATAGTATCA CTGCGGGTGG TAAGATTGAT
GCACCAATTC CACAGCGTAT TTTCTGGGCT TGTATTGAAG GTGCAATTGC AGCTGTTATG
CTTTGGGTTG GTGGTAAAGA AGCCTTGCAA GCATTGCAGT CCGGTGTGGT TGCAACGGGA
TTACCGTTTA CCTTTGTTCT GTTGTTGATG TGTGTAAGCT TGGTTAAAGG GTTAAGAACC
GAACTGTCAG CTTACAAATA A
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| Protein sequence | MDNAFKKYSI DTTDYQVGQD NVQKWGFDIH NPVFGISAGL VVFCLISLLL VEPTTARDVL
NGLKNGIIEQ FDAFFMWSTN FFLLFAVALL FSPLGKIRLG GKEATPDHST VSWLSMLFAA
GMGIGLLFWS VAEPTAYFTD WWGMPLNAVP YTEEAKSLAM GATMFHWGVH GWSIYALVAL
ALAFFAFNKG LPLSLRAAFY PIFGDRAWGW LGHVIDILAV LSTLFGLATS LGLGAQQATS
GINHVFGLEG GIGTQMIVII FVTFIAVLSV IRGIDGGVKL LSNVNMVVAF ALLIFITFIT
FDTAWGSLRD TTMAYIENII PLSNPHGRED ETWMHGWTVF YWAWWVSWSP FVGMFIARVS
KGRTVREFLF AVIVIPTVVT LIWMSVFGGI ALDQVVNKVG ELGANGLTDI SLTLFHVYDA
LPYSSVISML SIVLILVFFI TSSDSGSLVI DSITAGGKID APIPQRIFWA CIEGAIAAVM
LWVGGKEALQ ALQSGVVATG LPFTFVLLLM CVSLVKGLRT ELSAYK
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