Gene VEA_003539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_003539 
Symbol 
ID8557272 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp2126199 
End bp2127323 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content46% 
IMG OID646406634 
Productglycosyltransferase 
Protein accessionYP_003286164 
Protein GI262394310 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGACA TCGTAGTATT TGGAGAAGAT TTTGGCGGGT TACCCTCCTC CACTCAACAC 
ATTGTCAAAC GACTAGCAAC GAGCCACCGC ATCCTTTGGG TTAACTCAAT CGGTCTTCGT
CAACCTAGGC TGACCACTAA AGACATGCAA CGTGCGTTAA ACAAGCTCAC TCGTGTATTT
AATAACGCTG GATCGCATAA GCCAACGTTA GAGTCTGCAA TAAACCCAAA TATTCACACC
ATTAACCTAC TCACTATTCC TGCTCCAAGT TCTGCGCTGG CAAGAAAAGT AGCGGCTAAG
ATGATGAAAT ACCAGCTCAA TAAACAGTTA TACGTTCTTG GTTTTGATAA GCCTATATTT
TGGACATCGC TCCCGACGGC CGCAGATGTT TGTGCGGAAA TGAATTCACG TGGGCTAATT
TACTATTGTG GCGATGACTT TAGCGCTTTA GCTGGTGTTG ACCACGACAC GGTTGCCAAG
CATGAACGTA CACTGGTTAA CGCGGCTGAT GTGATTTTTA CAGCAAGTGA CAAACTCGCC
ACTCAATTTA CATCTGGTAA AACCGTCACT TTGCCTCACG GTGTCGACTT TAGTCTGTTT
TCTGAGCCAG CACCTAAGGC TGAAGATTTT CCTAATAATG GTCGCAAAGT GCTGGGCTTT
TATGGCAGTT TGTCTGAATG GTTAGACTAC GACTTAATTG CCCAAGTCGC AGACCAAGCG
CCTGACTGGG ATCTCGTGTT CATCGGCCCC AACGAGTTCA GTGATAATCC GCTTCCACAA
AGAAGCAACA TATACTACCT GGGCCCGAGA GCGCATCACA CTCTGCCACG TTACTCCCAA
CACTGGGATG CCAGTTGGTT GCCCTTTGTT GATAACGCTC AAATCAAGGC ATGTAATCCG
CTTAAACTTC TTGAGTACTT GGCAACAGGA ACCCCTGTTA TCAGCACACC GTTTCCTGCA
TTAATGCCCT ACAAACATAT GCTTCATGTG GTTCAAGATG TCGAAGACGT ACGTGCCAGT
CTCGATCACC TCCTACCGCC ACCGACAGAT TCAAAGTCAT TTGTTCAACA GCAAAGCTGG
GAAGCAAGAG CCAACCAAGT TGATAAATTA GTGAGGGCGC TATGA
 
Protein sequence
MTDIVVFGED FGGLPSSTQH IVKRLATSHR ILWVNSIGLR QPRLTTKDMQ RALNKLTRVF 
NNAGSHKPTL ESAINPNIHT INLLTIPAPS SALARKVAAK MMKYQLNKQL YVLGFDKPIF
WTSLPTAADV CAEMNSRGLI YYCGDDFSAL AGVDHDTVAK HERTLVNAAD VIFTASDKLA
TQFTSGKTVT LPHGVDFSLF SEPAPKAEDF PNNGRKVLGF YGSLSEWLDY DLIAQVADQA
PDWDLVFIGP NEFSDNPLPQ RSNIYYLGPR AHHTLPRYSQ HWDASWLPFV DNAQIKACNP
LKLLEYLATG TPVISTPFPA LMPYKHMLHV VQDVEDVRAS LDHLLPPPTD SKSFVQQQSW
EARANQVDKL VRAL