| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003538 |
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| Symbol | |
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| ID | 8557271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 2124719 |
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| End bp | 2126083 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646406633 |
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| Product | putative membrane protein of ExoQ family involved in exopolysaccharide production |
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| Protein accession | YP_003286163 |
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| Protein GI | 262394309 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
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| TIGRFAM ID | [TIGR03097] probable O-glycosylation ligase, exosortase system type 1-associated |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGAAA CCAAGGTGAG AAGAAAACAG TCCATCGCAG CGCTGACGAT TACCGTCTGT
ATCGGCCTGC TTTGGATTGT TATGCCTCAC CCTATTTTGA TCGTCGCACT ATGTTTCGCC
CCGCTGGCTT TACTGTTCGT TCTCAACCAA ACGTTTTGGC TTGTCACGCT GTTCGTTATT
TTTTCATTCT TCCGTATTCA TGAAGCGTTT CCCGTTATCT ATAACTTTAA GATCCCATTG
CTACTATCAT TGGGGGCACT GGCCGCACTT GCTTTCCACC TTTTGATAAG TCGCCAGCTT
ACGGCTTTTT GGCACCCTTC ATTAAAATGG TTGTGCATAT TTTGGGGGCT GGTGATCATC
GGCATCGTCT TCGCCTCCAG TCGTGACATT GCCATTACAG TTTTCAAAAA TACCTATTGG
AAAATCATCA TTATGACATT GGCGATCACC TGGCTTATTA CCAAGCCTGC TCAGTTAGCA
CAAATGTCGA AAGCGATAAT TTTCGCCGGA TTGTTGATTG GTTTAGTCGC ATTACAAAAC
GCAGCGAATG GCATTGATTT AGTCGAAGGG ACGCGCGTAT CGATTGGACG CTCCATAGGT
TCAGTACTCG GCGATCCGAA CGACTTGGCG CTGGTGTTAA TGTTTCCTCT CGCCTTTACC
GTTAGTCAGT TAATGGAGAA ACGTTCACCT AAGCATCTCC GGCTCTTTGC ACTTGTTACC
TGTTTGGTAT TGTTTTTTGC GATTATTGAG ACACAAAGCC GCGGAGGCTT GTTAGGCTCT
TTATCGGTAT TTGCGTACTT TGCCTTTAAG CACATCAAAA GCAAAACGTT AGTCTTAGTA
CTAGGCGCCG TAGCAGCCAT CGTACTCTAC GCATTTGCTG GTATCTCAGG GAGAGAATCG
GGTGGCGCAG CCGAGGATGG TATAGATGCC TCTGCGATGG GACGACTTTA CGCGTGGGAA
GCCGCATTTA AAATGGCTCT CCACCATCCG TTAACCGGTG TTGGGCTTGA TAATTTCTAC
TTCAATTACT ATTTCTATAG CCCTCACTGG GATGGTATCA ATCACGCCGT ACACAGTACT
TGGTTTGGCG TATTAGCAGA AACGGGGTTT GTTGGACTCG CCGTGTTCAT TACATTGATT
GTGTCATTGA TTCGAACCTC TTTGCATTCT ATTTCACTAC TGACGCCAAC ATCGGATTAC
ACCCTATCTG TTGGAGCAAA TGCAGTCTTA AGTGGGCTGA TCGGGACCAT CGTATCAGGC
ACCTTCCTCA CTCAAGGTTT CACTTGGCCA ATATACATTC TGGCGGCATT AACGGTAGTC
GTTAGCCGAA TCGTTCAAAG TGATTGTCAA AATGAGAAAC CCTAA
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| Protein sequence | MTETKVRRKQ SIAALTITVC IGLLWIVMPH PILIVALCFA PLALLFVLNQ TFWLVTLFVI
FSFFRIHEAF PVIYNFKIPL LLSLGALAAL AFHLLISRQL TAFWHPSLKW LCIFWGLVII
GIVFASSRDI AITVFKNTYW KIIIMTLAIT WLITKPAQLA QMSKAIIFAG LLIGLVALQN
AANGIDLVEG TRVSIGRSIG SVLGDPNDLA LVLMFPLAFT VSQLMEKRSP KHLRLFALVT
CLVLFFAIIE TQSRGGLLGS LSVFAYFAFK HIKSKTLVLV LGAVAAIVLY AFAGISGRES
GGAAEDGIDA SAMGRLYAWE AAFKMALHHP LTGVGLDNFY FNYYFYSPHW DGINHAVHST
WFGVLAETGF VGLAVFITLI VSLIRTSLHS ISLLTPTSDY TLSVGANAVL SGLIGTIVSG
TFLTQGFTWP IYILAALTVV VSRIVQSDCQ NEKP
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