Gene VEA_003502 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_003502 
Symbol 
ID8557235 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp2088020 
End bp2089999 
Gene Length1980 bp 
Protein Length659 aa 
Translation table11 
GC content46% 
IMG OID646406597 
Productsignal transduction histidine kinase 
Protein accessionYP_003286127 
Protein GI262394273 
COG category[T] Signal transduction mechanisms 
COG ID[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGCGTT ATCGCTTATT ATTTTTAACC TCCGCACCTA TCTTTCTGAC TTTGATAGCC 
CTGATCGGGA TTACCATTTA TTGGTCTATC CATTACACGT GGCAAAACGC GCTGCTGGAT
GTGTCAGAGC GTTTGGGTGT AGCAAATAAC AGCGTGACGT TGTTACAACA AAAGCAAGCC
AATTACGTGC GAGCGTTTGC TGACTCCTAC GACTTCCGAA CCCGAATCAA TCAAGGGACA
CCACAAGACG AGCTACAAAA GTGGGTTACT GAACAGAAAA AACGTTACTC CCTAGACTTT
CTCTCTTTCC AACGCGTTAA TTCGATGGAA AACAAATTCC GTTTTATGGA TCTCACCAAG
CGCGAATCGT TTTTTGATGT ACTCAATCGG GAAGAACTCG AACAGCTCGA TCCGGAACTC
GCCAAGCGAG CTGAAGTGCC CATTCTGGCT GACGGTGGAA TGGAAGCGCG CGGCTTGGTG
AGCCGTACCG TTATTCCGGT ATACAGCCAA GTGAACGATT TGATCGGCTT TCTTGATGGT
GGTTTGCTTC TCAATAACAG CACTGTATTG GTAGATCAAA TTCGCGACTT AATCTATCTC
AGCGATAATG ATCGCCTTCG TCCGGTTGGC ACGTTGACGG TATTTCTTGA TGATTTGCGT
GTAAGTACCA ACGTTCCTCT AGACAGCGAG TATAGGCTAG GGCGCGCCAT AGGCACTCGC
GTGAGCGCAG AAGTGTATAA CCAAGTACTT TCAAAAGGTG AGCAGTGGGT TGACCGAGCC
TATGTGTATG ACGCTTGGTA TATTACGGCG TATCAACCGA TCAAAGACCA ATACGACAAC
GTCATTGGTA TGCTTTATAC CGGTTACCTC ATGTGGCCAT TCGTTAAAGC CTACATGACC
AACATTGCAG AAATTAGCTT GATTACCATT ATGTTATTGC TGGTTTCCGG CGTGATGGTA
TATCGCGGTT CTTATGATCT GTTTCGACCG ATCGAACGCA TTCATAAAGT AGTCAAGCAG
GTCCAACAAG GAAAAGAAAA ACGGATTGGT CCATTGGGCT TAGATGCCGA TCATGAACTT
GCGCAGTTAG CCAGACAGTT TGATGATATG TTAGACGCGC TAGAAGAGCG CAAAATTGAA
CTGAAGAACT CCGCAGCGCA ACTTGAATGC AAAGTTCAAG AACGCACGGC AAGCCTTAGA
GAAAAAACCC AAGATCTAGA GCTGCATATT CAATTGCTCA ACCAAACTCG CGACAAACTC
GTTGTTCATG AAAAACTGGC AGCACTGGGA GAACTCACCG CGGGGATTGC TCACGAAATT
AATAACCCAA CCGCCGTGAT TCTTGGCAAT GTAGAATTGA TCCATTTTGA ATTGGGTGAC
GATGCAAGTC GAGTTCAAGA GGAGGTTGAT GCGATTCACG CGCAAATCGA CCGTATTCGC
AATATCACGC GCAGTTTATT GCAATACAGT CGCCAAGGTG GTGTTCAAGA TGAAATCACT
TGGCAACATG TCAATCCTAT CATTGATGAA AGCATCACCT TGGTTAAAAC GGGCACCAAG
AAACGCGACG TCGAGTTTGT GACTGATCTA CAAGCGCATA CGTCCGTTGA GATAAACCGT
CACCACTTGC TACAAATCTT AGTTAATTTG CAAATGAATG CCATTCACGC AATGAACGGC
AAAGGCACGT TAACAGTAGT CAGTGAAGAC TGGATTGAAG AGGGCGAAGT GAAAGGAGCC
GCGATTCATG TTATTGACGA GGGTTGCGGT ATTAAGCCAG AAAACTTGAA CCGAATCTTC
TCACCATTTT ACACGACGAA GCGAGAGGGT ACTGGATTGG GACTGTCGGT CTCTCAAAGT
ATCCTCAGCC AAACGGGTGG TGAGCTAAAA GCCGAGTCGG AATGGGGAAA GGGCAGTAAA
TTCAGTATTT ATTTACCTAA AAAAGCCGAG CTGATCCTAG AGGTGACGAA TATCGCTTAG
 
Protein sequence
MVRYRLLFLT SAPIFLTLIA LIGITIYWSI HYTWQNALLD VSERLGVANN SVTLLQQKQA 
NYVRAFADSY DFRTRINQGT PQDELQKWVT EQKKRYSLDF LSFQRVNSME NKFRFMDLTK
RESFFDVLNR EELEQLDPEL AKRAEVPILA DGGMEARGLV SRTVIPVYSQ VNDLIGFLDG
GLLLNNSTVL VDQIRDLIYL SDNDRLRPVG TLTVFLDDLR VSTNVPLDSE YRLGRAIGTR
VSAEVYNQVL SKGEQWVDRA YVYDAWYITA YQPIKDQYDN VIGMLYTGYL MWPFVKAYMT
NIAEISLITI MLLLVSGVMV YRGSYDLFRP IERIHKVVKQ VQQGKEKRIG PLGLDADHEL
AQLARQFDDM LDALEERKIE LKNSAAQLEC KVQERTASLR EKTQDLELHI QLLNQTRDKL
VVHEKLAALG ELTAGIAHEI NNPTAVILGN VELIHFELGD DASRVQEEVD AIHAQIDRIR
NITRSLLQYS RQGGVQDEIT WQHVNPIIDE SITLVKTGTK KRDVEFVTDL QAHTSVEINR
HHLLQILVNL QMNAIHAMNG KGTLTVVSED WIEEGEVKGA AIHVIDEGCG IKPENLNRIF
SPFYTTKREG TGLGLSVSQS ILSQTGGELK AESEWGKGSK FSIYLPKKAE LILEVTNIA