| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003481 |
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| Symbol | |
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| ID | 8557214 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 2062706 |
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| End bp | 2063821 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 646406576 |
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| Product | spermidine putrescine transport ATP-binding protein PotA |
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| Protein accession | YP_003286106 |
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| Protein GI | 262394252 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000145818 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAACGCAA AACCGCAAGC AGGAAAGCCA GTTATTCGTT TATCTGGTAT TAGTAAAAGT
TTCGATGGTA AGGAAATCAT CGGTAATTTA AATCTGGATG TTAATCATGG TGAGTTTCTG
ACGATTCTTG GGCCTTCTGG TTGTGGTAAA ACGACAGTTT TACGAATGAT CGCTGGTTTT
GAAGCGGCGG ATAACGGTCA AATCATTTTG GATGACCAAG ATGTAACACA GGTTCCTGCT
GAGCAGAGAC ACGTCAACAC GGTATTTCAA AGTTACGCAC TGTTTCCACA CATGACCGTA
TATGAGAATG TCGCTTTTGG TCTTCGTATG CAAAAAACGC CTGCAGCAGA GATTGAACCA
AGAGTAATGG AAGCATTACG TATGGTTCGT CTAGAAAAAA TGGCACAGCG TAAACCGCAC
CAACTTTCTG GTGGCCAGCA ACAGCGTATC GCAATTGCTC GTGCAGTTGT TAATAAACCA
AAAGTACTTC TGCTCGATGA ATCGCTATCG GCGCTGGACT ACAAGTTGCG TAAACAAATG
CAGATCGAGT TGAAGCAGCT TCAGCGTCAA CTTGGTATTA CCTTTATCTT TGTAACACAC
GACCAGGAAG AAGCCCTATC GATGTCAGAC CGCATTATCG TGATGCGTGA TGGCGTTATC
GAACAAGATG GCTCTCCGCG TGAGATTTAC GAAGAGCCTA AGAACCTGTT TGTTGCTCGC
TTTATTGGTG AGATCAACGT ATTCAATGCA ACCATGCTAG AGCGCATCGA TGACAAACGC
ATCCGCGCAG AAATTGAAGG TGTTGAATCC GTCGTTTACT ACGATAAGGA AGCACAGAAA
GGCGACAAAC TACAAGTACT ACTTCGCCCT GAAGACTTAC GTATCGAAGA AATCAAAGAG
TCTGAAGAAA AAGGCATTGT TGGTCACGTA ACTGAGCGTA CTTATAAAGG TATGACGTTA
GATTCTGTTA TCCAATTGGA TTCAGGTATG CGTGTAATGG TAAGCGAATT CTTTAACGAA
GATGATCCTG ATGTGGACCA CTCACTTGGC CAGAAAGTCG CTATCACTTG GGTTGAGAGC
TGGGAGGTAG TACTCAATGA TAAGCAAGAA GATTAA
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| Protein sequence | MNAKPQAGKP VIRLSGISKS FDGKEIIGNL NLDVNHGEFL TILGPSGCGK TTVLRMIAGF
EAADNGQIIL DDQDVTQVPA EQRHVNTVFQ SYALFPHMTV YENVAFGLRM QKTPAAEIEP
RVMEALRMVR LEKMAQRKPH QLSGGQQQRI AIARAVVNKP KVLLLDESLS ALDYKLRKQM
QIELKQLQRQ LGITFIFVTH DQEEALSMSD RIIVMRDGVI EQDGSPREIY EEPKNLFVAR
FIGEINVFNA TMLERIDDKR IRAEIEGVES VVYYDKEAQK GDKLQVLLRP EDLRIEEIKE
SEEKGIVGHV TERTYKGMTL DSVIQLDSGM RVMVSEFFNE DDPDVDHSLG QKVAITWVES
WEVVLNDKQE D
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