| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003467 |
|---|
| Symbol | |
|---|
| ID | 8557200 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013456 |
|---|
| Strand | + |
|---|
| Start bp | 2049771 |
|---|
| End bp | 2051198 |
|---|
| Gene Length | 1428 bp |
|---|
| Protein Length | 475 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 646406562 |
|---|
| Product | cytochrome c oxidase subunit CcoN |
|---|
| Protein accession | YP_003286092 |
|---|
| Protein GI | 262394238 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG3278] Cbb3-type cytochrome oxidase, subunit 1 |
|---|
| TIGRFAM ID | [TIGR00780] cytochrome c oxidase, cbb3-type, subunit I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAAG TAAAGCAGCT TGAACAAAAC TACAACTATA CAGTCGTTCG CCAATTTACC
CTTGTGACCA TTTTATGGGG CATAGTTGGT ATGGCTGTTG GTGTTTTGAT TGCCGCTCAA
TTAGTTTGGC CACAGCTAAA CTTTGATACG CCGTGGTTGA CGTACAGTCG CTTACGTCCA
CTGCATACTA ATGCGGTAAT TTTTGCGTTT GGTACAAGTG CTCTGTTCGC AACGTCTTAT
TATGTTGTAC AGCGCACATG TCAAACACGT CTTTTTGGTG GCCCACTCGT TGCCTTCACC
TTTTGGGGTT GGCAAGCAAT CATCCTGGCA GCAGCCATTA CTTTGCCTCT CGGTTTAACA
TCGGGTAAAG AGTATGCTGA GCTAGAATGG CCTATTGATA TCGCAATTGC GCTAGTATGG
GTATCATATG CGGTGGTGTT CTTTGGCACA CTGGTGAAGC GAAACACGTC ACATATTTAT
GTGGCAAACT GGTTCTTCGG TGCCTTTATT ATCACAGTAG CAGTACTTCA CATCGTGAAC
AGCATGGCTA TTCCTGTGTC ACTTGGTAAA TCTTACTCGA TTTACTCAGG CGCAGTGGAT
GCGATGGTTC AGTGGTGGTA TGGACACAAT GCGGTAGGTT TCCTACTGAC CGCTGGTTTC
CTAGGTATGA TGTACTACTT CGTTCCTAAA CAAGCTGAAC GTCCTGTTTA TTCTTACCGT
CTATCTATCG TTCACTTCTG GGCGCTTATT TCTCTATATA TTTGGGCAGG CCCTCACCAC
CTTCACTATA CAGCGCTACC GGACTGGACT CAGTCTCTAG GTATGGTGAT GTCGCTGGTT
CTATTTGCTC CTTCTTGGGG TGGTATGATC AACGGTATTA TGACGTTATC TGGTGCATGG
CATAAGCTTC GTTATGACCC TATCCTACGT TTCCTAATCG TTTCACTGTC GTTCTACGGT
ATGTCTACCT TTGAAGGCCC GATGATGTCG ATTAAGACGG TTAACGCACT TTCTCACTAC
ACAGACTGGA CCATTGGTCA CGTTCACTCT GGTGCGTTAG GTTGGGTTGC GATGGTTTCT
ATCGGCTCTG TATATCACTT AGTACCTCGC CTATTTGGCC AAGAGCGTAT GTACTCTGTT
GGTCTCGTGA ATGTGCATTT CTGGCTAGCA ACAATCGGTA CCGTTCTTTA CATCGTTGCG
ATGTGGATCT CTGGTGTAAT GCAAGGTCTG ATGTGGCGCG CGGTTAACTC TGACGGTACG
CTAACTTACA GCTTTGTTGA GTCTGTAGAA GCGTCTTATC CGTTCTACTT TGTACGTTTC
TTAGGTGGAT TTATCTTCCT ATCTGGTATG TTCCTAATGG CATACAACAC GTACAAAACG
GTAAGTGCAC CAAAAGAAAG CCTAAAAGCT ATCCCACATC CGGCATAA
|
|---|
| Protein sequence | MSQVKQLEQN YNYTVVRQFT LVTILWGIVG MAVGVLIAAQ LVWPQLNFDT PWLTYSRLRP
LHTNAVIFAF GTSALFATSY YVVQRTCQTR LFGGPLVAFT FWGWQAIILA AAITLPLGLT
SGKEYAELEW PIDIAIALVW VSYAVVFFGT LVKRNTSHIY VANWFFGAFI ITVAVLHIVN
SMAIPVSLGK SYSIYSGAVD AMVQWWYGHN AVGFLLTAGF LGMMYYFVPK QAERPVYSYR
LSIVHFWALI SLYIWAGPHH LHYTALPDWT QSLGMVMSLV LFAPSWGGMI NGIMTLSGAW
HKLRYDPILR FLIVSLSFYG MSTFEGPMMS IKTVNALSHY TDWTIGHVHS GALGWVAMVS
IGSVYHLVPR LFGQERMYSV GLVNVHFWLA TIGTVLYIVA MWISGVMQGL MWRAVNSDGT
LTYSFVESVE ASYPFYFVRF LGGFIFLSGM FLMAYNTYKT VSAPKESLKA IPHPA
|
|---|
| |