Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_003431 |
Symbol | |
ID | 8557164 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | + |
Start bp | 2010712 |
End bp | 2012718 |
Gene Length | 2007 bp |
Protein Length | 668 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 646406526 |
Product | tail-specific protease precursor |
Protein accession | YP_003286056 |
Protein GI | 262394202 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0793] Periplasmic protease |
TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00461835 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTGCC GTTCAAAAGT GACACTGATT GCTGCTAGCT TATGGCTAGC AGCATCAGCT CAGGCTCTCG AAGCCAAACT ACATAAAGAT GACTTGCCGG TTCTCGCTCC TGAAGTTCAG CACGAAACAG CTAGCAAACG AGTCACCTCT CGATTTACCC GCTCTCATTA TAAGCATTTC AGCCTCAATG ATGATTTCTC CAAAGCGATC TTTGAACGCT ATGTAGAATT GCTTGATTAT AATAGAAATA TTTTTACTCA AGCGGACATC GACTCTTTTA AAGACTGGTC AATTGAGCTT GATGATCAGC TAAAGGCTGG TAACAACCAA ATTGCTTTTG ATGTTTATAA CCTCTCAATG CAAAAGCGTT TCGAGCGCTT TGCTTATGCG TTAACGCTAC TCGACGAAGA GATCAAGTTT GATACTGATG ACGAGATAGA GTTAGACCGT TCTGAAGCTG CATGGCCAAA AGACGAAGCG GAGCTCAACG AGTTATGGCG TAAGCGCGTG AAATATGACG CGTTAAATCT GAAACTGACT GGCAAAGAAT GGCCAGAGAT TAAAGAGGTT TTAGAGAAGC GTTATAACAA CGCGATGAAG CGGATCACAC AGACTAATAA CGAAGATGCA TTCCAGTTAT ATATGAATGC CTTCGCCCGA CAAGTCGACC CTCATACTAG CTACCTTTCT CCACGTAATG CTGAGCAATT CCAATCGGAA ATGAACCTTT CTCTGGAAGG CATTGGTGCC GTTCTGCAAA TGACTGACGA TTACACAGTA ATTCGTTCAC TTGTTGTTGG TGGCCCTGCG TCGAAGAGCA AGCAGCTTGG CGAAGGGGAT CGAATCATCG GTGTTGGACA AGACGGTGAA GAGATTGTCG ACGTGATCGG TTGGCGTCTG GATGATGTAG TTCAATTAAT CAAAGGCCCA AAAGGCACAA AGGTTAATCT ACAGATCTTG CCAGAAGGTA ACGATGCGAA GAGTTACATT GTCACAATTG TTCGTGACAA AGTTCGCCTA GAAGATCGCG CAGTGAAGTC GGAGATCATC GAAAAAGATG GTAAGAAGAT TGGTATTTTA GAAGTGCCAA GTTTCTACGT CGGTTTGTCG AAAGATACCG ATAAACTGCT TGCTGAGTTA AAAACCAAAA ACGTTGACGG CGTAATCGTT GATCTACGTA ACAACGGTGG TGGTGCATTA ACGGAAGCGA CAGCATTAAC AGGGTTATTC ATTAAAGAAG GTCCTGTTGT TCAAGTTCGT GACAGCTATG GTCGTATTAA GGTGAACGCC GATACTGACG GAAAAGTGAG CTACGATGGT CCACTGACGG TGTTGATTAA CCGCTACAGT GCTTCAGCGT CTGAAATTTT TGCAGCAGCA ATGCAAGATT ATAATCGTGC AATTATTTTA GGTGAAAATT CTTTCGGTAA AGGTACGGTT CAACAGCATC GTTCACTGAA TCATATCTAC GATCTTTTCG ATAAAGAGCT AGGCTACGTT CAGTACACGA TTCAGAAGTT CTACCGTATT GACGGTGGAA GTACGCAAAA TCGTGGTGTT GCACCCGATA TTTCGTACCC AACACCAATT GAAGCTTCTG AAACGGGTGA AAGTGTAGAA GACAATGCAC TACCTTGGGA TCAGATTGAT AAAGCAAAAT ATCAAACCTT CCCAAGCAAC GAAGCACTAG TTGAAAAGCT TACCGCTCTT CATAACAAGC GTATTTCTGA TGAGATGGAA TTCCGTTTCA TCAATGAAGA CATAGAGAAG TATCGTAAAG AAAAAGACGA TAATATGTTG TCTTTGAACG AGAAAGTTCG TAAGGCTGAA TCGGATAAAG CGGAAGCACT TCGTTTGCAA CGCATCAATG AGCGTCAAGC TGCTTTAGGT AAGGAAGCAT TCAAAACATT GGATGATATA CCTAAAGATT ATGAAGCGCC TGATGTTTAT TTAGATGAGT CTGTCGCGAT TATGGTTGAT CTACTCAAGC AGAAAAATCA GTCATAA
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Protein sequence | MNCRSKVTLI AASLWLAASA QALEAKLHKD DLPVLAPEVQ HETASKRVTS RFTRSHYKHF SLNDDFSKAI FERYVELLDY NRNIFTQADI DSFKDWSIEL DDQLKAGNNQ IAFDVYNLSM QKRFERFAYA LTLLDEEIKF DTDDEIELDR SEAAWPKDEA ELNELWRKRV KYDALNLKLT GKEWPEIKEV LEKRYNNAMK RITQTNNEDA FQLYMNAFAR QVDPHTSYLS PRNAEQFQSE MNLSLEGIGA VLQMTDDYTV IRSLVVGGPA SKSKQLGEGD RIIGVGQDGE EIVDVIGWRL DDVVQLIKGP KGTKVNLQIL PEGNDAKSYI VTIVRDKVRL EDRAVKSEII EKDGKKIGIL EVPSFYVGLS KDTDKLLAEL KTKNVDGVIV DLRNNGGGAL TEATALTGLF IKEGPVVQVR DSYGRIKVNA DTDGKVSYDG PLTVLINRYS ASASEIFAAA MQDYNRAIIL GENSFGKGTV QQHRSLNHIY DLFDKELGYV QYTIQKFYRI DGGSTQNRGV APDISYPTPI EASETGESVE DNALPWDQID KAKYQTFPSN EALVEKLTAL HNKRISDEME FRFINEDIEK YRKEKDDNML SLNEKVRKAE SDKAEALRLQ RINERQAALG KEAFKTLDDI PKDYEAPDVY LDESVAIMVD LLKQKNQS
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