Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_003418 |
Symbol | |
ID | 8557151 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | - |
Start bp | 1994469 |
End bp | 1995497 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 646406513 |
Product | amino acid ABC transporter amino acid-binding protein |
Protein accession | YP_003286043 |
Protein GI | 262394189 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.49248 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAATA AACTCACAGT TCTTGCTTCC GTCGTAGCGG CTTCTACTGC GATGATGGCA ACATCAGCTC AAGCAGCAGA CACTACTCTG GACAAAGTCA CAAAACAAGG TTTTCTTACT TGTGGCGTAA GTACCGGTCT ACCTGGTTTC TCTAACCCTA ACTCAAAAGG TGAATGGGAA GGTATCGACG TAGAATATTG CCAAGCACTG GCTGCAGCCG TTCTTGGGGA TAAAACGAAA GTTAAATATG TACCCCTAAC CGCGAAAGAA CGTTTCACTG CGCTTCAATC AGGTGAGATT GATGTGCTTT CTCGTAACAC CACCTGGACA CTGCATCGTG ATACTGCACT TGGCCTAAAC TTCGTAGGGG TAAACTACTA CGATGGCCAG GGCTTCATGG TGAAGAAAGA TCTTGGCATC TCAAGCGCAA AAGAGCTTGA TGGTGCATCA GTTTGCGTAC AGTCCGGTAC AACAACTGAG CTGAACCTTG CTGACTACTT CCGTAACAGC GGTATGTCAT ACAAGCCGGT CGTATTCGAT ACGGCAGCCC AAACGTCAAA AGGTTTCGAT GCAGGACGTT GTGATGTGTT AACGACTGAC CAATCTGGTC TTTATGCATT GCGTCTAAAC CTGAAAGATC CCTCTTCTGC AGCCGTTCTT CCGGAAATCA TTTCCAAAGA ACCACTAGGT CCCGTCGTTC GTCAAGGTGA TGACCAATGG TTCAACATTG CGAAGTGGAC ATTATCAGCA ATGATTAACG CCGAAGAGTA TGGTATTAGT TCGAAAAATG CGGATGAAAT GCTGAAATCG AAAGATCCAA ACATCAAACG TATTCTTGGT GTTGACGGTC CGAAAGGCAA AGGTTTGGGT ATTCGTGATG ATTGGGGCTA CCAAGTTATC AAGCAAGTCG GTAACTATGG TGAAAGCTTC GAACGCACAG TCGGTACTGG TTCGCCGTTA GAAATTTCTC GTGGCGTTAA TGCGCTATGG AATGCAGGCG GCTTTATGTA CGCGCCACCA ATCCGATAG
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Protein sequence | MANKLTVLAS VVAASTAMMA TSAQAADTTL DKVTKQGFLT CGVSTGLPGF SNPNSKGEWE GIDVEYCQAL AAAVLGDKTK VKYVPLTAKE RFTALQSGEI DVLSRNTTWT LHRDTALGLN FVGVNYYDGQ GFMVKKDLGI SSAKELDGAS VCVQSGTTTE LNLADYFRNS GMSYKPVVFD TAAQTSKGFD AGRCDVLTTD QSGLYALRLN LKDPSSAAVL PEIISKEPLG PVVRQGDDQW FNIAKWTLSA MINAEEYGIS SKNADEMLKS KDPNIKRILG VDGPKGKGLG IRDDWGYQVI KQVGNYGESF ERTVGTGSPL EISRGVNALW NAGGFMYAPP IR
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