Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_003415 |
Symbol | |
ID | 8557148 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | - |
Start bp | 1991946 |
End bp | 1993043 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 646406510 |
Product | amino acid ABC transporter permease protein |
Protein accession | YP_003286040 |
Protein GI | 262394186 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000100001 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTACTC ATCAATTTCA ACCGGATCTC CCACCACCAG CCAATACCGT CGGTTTTGTT GGTTGGATGC GGAAAAACCT ATTTAATGGA CCTGTCAATT CCATTGTTAC CGTAATTCTT GCTTATCTTG TCTTTAGTGC AATTTGGCAT ATCGTTGATT GGGCGTTTAT CAACGCGGAC TGGATTGGTT CGACGCGTGA CGATTGCAGC CGAGAAGGTG CTTGCTGGGT ATTTATCAGC GTGCGCTGGG AGCAGTTCAT GTACGGTTTC TATCCTGAGT CTGAACTGTG GCGCCCTCGC CTTTTCTATA TCACATTGGC TATATTTACT GTGTTGCTAG CGTATGAAAA GACACCGAAA CGGATTTGGA TTTGGCTTTT CTTCGTAAAC ATCTACCCAT TCATTATCGC TGGGCTGTTA TATGGTGGGA TATTTGGGCT AGAAGTGGTC GATACACACA AATGGGGCGG ATTACTCGTT ACGCTCATTA TTGCGCTAGT CGGTATTGTC GTTTCATTAC CGATTGGTGT GGTACTCGCG CTCGGTAGAC GTTCAGAGAT GCCCATCATT CGCAGTATTT GTACCGTCTA TATTGAAGTT TGGCGTGGTG TGCCACTGAT TACCGTTCTG TTCATGGCTT CCGTTATGCT GCCTTTGTTT ATGTCCGAAG GATCAGAGAC AGACAAACTT ATTCGCGCTC TTATTGGTGT GGTGATGTTT GCCTCGGCGT ACATGGCCGA AGTGGTACGG GGCGGCTTAC AAGCGATTCC AAAAGGCCAA TATGAGGCTG CCGACGCACT TGGGTTAAGT TACTGGAAAA AAACAGGGCT TATTATCTTG CCGCAAGCGC TGAAGATTAC GATCCCTTCT ATCGTGAACA CGTTTATCGG ATTGTTTAAA GACACCAGTT TGGTTCTTAT CATTGGTATG TTTGACGTAC TAGGTATAGG ACAAGCAGCA AACACAGACC CTGACTGGCT AGGCTTTGCT ACTGAAAGTT ATGTATTTGT CGCGTTAGTG TTTTGGGTAT TTTGTTTTGG CATGTCGCGT TATTCGATAT GGCTTGAAAA CAAACTTCAT ACCGGTCACA AACGATAA
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Protein sequence | MSTHQFQPDL PPPANTVGFV GWMRKNLFNG PVNSIVTVIL AYLVFSAIWH IVDWAFINAD WIGSTRDDCS REGACWVFIS VRWEQFMYGF YPESELWRPR LFYITLAIFT VLLAYEKTPK RIWIWLFFVN IYPFIIAGLL YGGIFGLEVV DTHKWGGLLV TLIIALVGIV VSLPIGVVLA LGRRSEMPII RSICTVYIEV WRGVPLITVL FMASVMLPLF MSEGSETDKL IRALIGVVMF ASAYMAEVVR GGLQAIPKGQ YEAADALGLS YWKKTGLIIL PQALKITIPS IVNTFIGLFK DTSLVLIIGM FDVLGIGQAA NTDPDWLGFA TESYVFVALV FWVFCFGMSR YSIWLENKLH TGHKR
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