| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003330 |
|---|
| Symbol | |
|---|
| ID | 8557063 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013456 |
|---|
| Strand | + |
|---|
| Start bp | 1892690 |
|---|
| End bp | 1894210 |
|---|
| Gene Length | 1521 bp |
|---|
| Protein Length | 506 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 646406425 |
|---|
| Product | aldehyde dehydrogenase |
|---|
| Protein accession | YP_003285955 |
|---|
| Protein GI | 262394101 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCTATG CACAGCCAGG TAGTGAAAAT GCCATCGTTA ATTTCAAATC GCATTACGAT
AATTTTATCG GTGGGGAATG GGTAAAACCA ACGGGCGGTG AGTACTTTGA CAATATCTCA
CCAATCAATG GGCAAGCGTA TTGTAAAGTT GCCCGTTCTG GCGAGGCAGA TATCAACTTA
GCATTGGATG CGGCACACAA CATCAGAACT AAATGGGCAA AAACCAGTGT GACTGAACGC
TCGAACATCT TGCTGAAAAT TGCTGATCGT ATTGAGCAGC ATTTAGAAGA GTTGGCAGTT
GCCGAAACTT GGGAAAACGG CAAACCAGTT CGCGAGACCT TGGCGGCAGA TTTACCTTTA
GTGGTAGATC ATTTCCGTTA CTTTGCTGGC TGTATTCGCG CACAAGAAGG CAGTGCGGCG
GAGCTGGATG AGCACACAGC AAGCTACCAC TTCCCGGAGC CGATTGGCGT GGTTGGTCAA
ATTATCCCGT GGAACTTCCC AATGTTGATG GCGGCTTGGA AGCTGGCACC GGCACTTGCG
GCAGGTTGTT GTGTGGTATT GAAGCCAGCA GAACAAACGC CAACGTCGAT TCTGGTTCTT
ATGGAAAAGA TCGGTGATCT ACTGCCACCG GGCGTCATTA ACGTTGTTAA TGGGTTTGGT
TCAGAAGCGG GCCAAGCGCT TGCAACCAGC AACCGCATTG CGAAGTTAGC GTTTACCGGT
TCAACACAAG TTGGCAATCA CATTCTAAAA TGTGCAGCAG ACAACTTGAT CCCATCGACA
GTGGAGCTAG GTGGTAAATC TCCAAACATC TACTTCTCAG ATGTTTTCGA TTACGAAGAT
GAGTACCTCG ACAAGTGTAT CGAAGGTACG CTACTTGGCT TCTTCAACCA AGGCGAAGTT
TGTACCTGTC CATCTCGCGT ATTAGTTCAT GAAGCGATTT ACGATAAGTT TGTAGAGAAA
TTGACGGAAC GTGCGCAGTT AATCAAGCAA GGTAACCCGC TCGATACCGA TACTCAAGTA
GGCGCCCAAG CTTCTCAAGA ACAGTTTGAT AAGATTTTAA GTTACCTAGA AATCGGCCGT
GAAGAAGGTG CAAAAGTGGT CTTTGGTGGT GGTGTCTCTG AACAGCCAGA GTCAATCAAT
CAGGGTTACT ACATTCAACC AACAATGTTG GAAGGCCACA ATAAGATGCG TATTTTCCAA
GAAGAAATCT TTGGCCCCGT CATTGCCATC ACTAAGTTTA AAGATGAAGC GGAAGCATTA
GAAATTGCGA ACGACACCGA ATATGGCTTA GGCGCAGGTG TTTGGACGCG TGATGCGAAC
GTCGCATATC GTATGGGCCG TAATATCGAA GCTGGTCGAA TCTGGATTAA CTGTTACCAC
GCTTACCCTG CACACGCAGC GTTCGGTGGT TACAAAAAGT CGGGTATCGG CCGAGAAACA
CATAAGATGA TGCTGGATCA CTACCAAAAT ACGAAAAACC TATTGATTAG CTACAGTGTT
GATCCACTAG GCTTCTTCTA A
|
|---|
| Protein sequence | MIYAQPGSEN AIVNFKSHYD NFIGGEWVKP TGGEYFDNIS PINGQAYCKV ARSGEADINL
ALDAAHNIRT KWAKTSVTER SNILLKIADR IEQHLEELAV AETWENGKPV RETLAADLPL
VVDHFRYFAG CIRAQEGSAA ELDEHTASYH FPEPIGVVGQ IIPWNFPMLM AAWKLAPALA
AGCCVVLKPA EQTPTSILVL MEKIGDLLPP GVINVVNGFG SEAGQALATS NRIAKLAFTG
STQVGNHILK CAADNLIPST VELGGKSPNI YFSDVFDYED EYLDKCIEGT LLGFFNQGEV
CTCPSRVLVH EAIYDKFVEK LTERAQLIKQ GNPLDTDTQV GAQASQEQFD KILSYLEIGR
EEGAKVVFGG GVSEQPESIN QGYYIQPTML EGHNKMRIFQ EEIFGPVIAI TKFKDEAEAL
EIANDTEYGL GAGVWTRDAN VAYRMGRNIE AGRIWINCYH AYPAHAAFGG YKKSGIGRET
HKMMLDHYQN TKNLLISYSV DPLGFF
|
|---|
| |