Gene VEA_003316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_003316 
Symbol 
ID8557049 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp1874712 
End bp1875800 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content47% 
IMG OID646406411 
ProductABC-type multidrug transport system permease component 
Protein accessionYP_003285941 
Protein GI262394087 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCTCGCGA TGATGATTTG GGGAGTGTTC TCTGCGGGCA TTGCCCGGGA TCTGCCAATC 
GGTGTGGTTG ATCTACAACA TTCCCAACTT TCTCGAAAGC TCATTCAATC TTTGGATGCG
TCGTCGAGTC TGGCTGTTAA CTATCACTAC ACCAGTGCAA GCGAAGCAAA AAATGCGATG
ATTGAAGGCG ATATCTACGC TTACGCGGTC ATCCCATCTA AGTTCGATCA GGATATTCTC
CAACACCGCC AACCTCAACT TTCTGTCTTT TACAACAGTC AGTACATTTT GGTAGCGAAA
TTGATCAACT CTGCCGTTGC GCAAGCACAA GGCTATTTCG ACGCTCAGGT TGAAGTAATG
AGCAACTTGG CTAAGGGTAA CACCACAACG TTAGCAGCGG CTGGTCAGGC TGTACCCGTG
TCGACACAAA TAACCGCATT ATTTAACCGT AACAATAACT ACGCACAATT TTTGGTAACG
GCTATCGTGC CAGCCATTTG GCAAATATGT ATTGTAGTAA GCACTATCTT GATTCTTACC
TCGCACTTTC GCATTTATGG TGGAAAGAAT GGCTTTGCGT TTTTGGGCGA AAAGCCATAC
GCCAAGCTCA CTTCCCTATT AAGTCAGTAC ATTCCGGTCT TTATGGCGCA AGGTGCGTTG
TTCTTGTATT GGTTTTATTC CGTGCTTGAT TGGCCAATGG AAGGCAGTTT TGTGGTTATG
CTACTAGCAC AATTGGCGAC GGTTATCGCC TGTATCATTA TGGGATCGTT GTTCTTCTTC
TTGTCGATGG ATCCTGCACG TGCGATGAGT TTTGCTGGCG CGTTTACGGC TCCAAGCTTC
GCGTTCATGG GAATTACATT CCCAGTTTCT GACATGAACA CGCTCGCTTA TGCATGGCGC
TCATTATTGC CGATTACCCA TTACATTGAA GTACAAGTGA GTCAAGCAAG CTATGGAACA
TCGGCCGCAC AATCTTTAAG CTCGCTATGG CCTATGATTG GCTACGTTGT GCCCCTGCTC
ATTACCGCAG CCTTGATGGG TAAACATCGA ACAGCTTCAT CAACACGCCA AGCGAAGGAG
GCGGTATGA
 
Protein sequence
MLAMMIWGVF SAGIARDLPI GVVDLQHSQL SRKLIQSLDA SSSLAVNYHY TSASEAKNAM 
IEGDIYAYAV IPSKFDQDIL QHRQPQLSVF YNSQYILVAK LINSAVAQAQ GYFDAQVEVM
SNLAKGNTTT LAAAGQAVPV STQITALFNR NNNYAQFLVT AIVPAIWQIC IVVSTILILT
SHFRIYGGKN GFAFLGEKPY AKLTSLLSQY IPVFMAQGAL FLYWFYSVLD WPMEGSFVVM
LLAQLATVIA CIIMGSLFFF LSMDPARAMS FAGAFTAPSF AFMGITFPVS DMNTLAYAWR
SLLPITHYIE VQVSQASYGT SAAQSLSSLW PMIGYVVPLL ITAALMGKHR TASSTRQAKE
AV