| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003289 |
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| Symbol | |
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| ID | 8557022 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 1849597 |
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| End bp | 1851741 |
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| Gene Length | 2145 bp |
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| Protein Length | 714 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 646406384 |
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| Product | pathogenesis related protein |
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| Protein accession | YP_003285914 |
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| Protein GI | 262394060 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3593] Predicted ATP-dependent endonuclease of the OLD family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.31747 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTAG CGCGAATTGA AATTTCAAAT TTTAGATTAC TAAAAAGCTT TACCTTAGAC
TTAGAAGACG AATTGTCTCT AGTTATAGGT AAAAACAATA CAGGTAAGAC TTCAGTGTTA
GCTTGCTTAG ATAAACTCGC CGTACAATCT GACAAAAAAG CTATTAGCTA TGAGGACTTC
AATGTTGATT TAATGTCTTC TATTGAGGCT GTGTTGCTTG GTGAGCAAAC TATAGGAAAT
GAAGAAGAAT ACTCTCCTTT GGGCATTCAG CTAAAACTGT TTATAAAATA CAGTGAATCA
GATGACCTAT CCAAGATTAG TTCGTTGATT ATGAGTCTAG ATCCTGTTGA TGACAATGTA
GTCCTTTCCT TTGAGTACAA AATAGCATTT GATAAGATAG TTGACCTGAA AGCAGCTTAT
GAGAATGACG CGGAAAAATT TGAAAATAGT CCTCGTTTAT TCTTGAAAGA GAACCTCTCT
GATTACTTTG GCCCAGTGGT AAAGAAAAGT TTACTGAAAG GTGATGAAAG TCAATTTATT
GATTTGAATA AAGAAAATAT TAACCTAAAA GATATTTTGT CAATTCAGTT CATCAATGCG
AAAAGAAGCG TAACAAATAA GCAAAATGAT AAAACTCTAT CGAACCAAAC ATCAAGTTTG
TATAAACAAG TCGATGAATC TGATGAACAA GTAGATGCGT CGAACGAGTT TAAAAAAGAG
CTGCGTAAAA CGGATACTAA GCTGAGTGGC ATCTATCAGA ACATGTTTAA AGATGTCATC
GAGAAAGTTA ACAGGTTTGG TGGTATTAGC CCGACAGATA CAACTATCAA AGTTGCATCT
ACGCTACAGC ATCGAGAGTT GTTGGAAGGT AACACCACGG TAATGTATCA GCACCAAAGC
CATGACCTTC CTGAACACTA CAATGGTTTA GGGTACATGA ACTTAATCAG TATGATTTTC
GAGATTGAAA TGCTGATGAG TAGGTTAAGA AAGTCACTTA AAGAACAACC CGCTACGATT
AACTTACTTT TTATTGAAGA GCCTGAAGCA CATACCCACC CACAGATGCA GTATGTATTT
ATTAAAAATA TTAAAAAACT GCTAAAGGAA AATCGCATAA GAGAAGACGG TATAGAGATT
CATTTACAAT CAATTATTAC TACTCATTCC TCTCACATCG TATCAGAAAG CAGCTTTGAT
GATATTAAGT ATTTGAAAAA AGAGCCGCAA TCTCATCAAG TACAGGCTAA GAACCTAAAG
GATTTAGAGC TGGAGTATAG CTCTAAAGAA GATCCTGAAA AAGATGCAGA GCTTAAACAG
TCATATCGTT TTTTGAAACA ATATTTAACC CTGAATCGAG CTGAGTTGTT TTTTGCAGAT
AAAGCAATTT TTATAGAAGG CGATACTGAG CGGGTTATTT TACCTGCAAT GATGAAGAAA
ATAGATCAAG AGAATGAAGT TGATAATATG CAGCCGCTAT TATCTCAAAA CATTTCAATG
ATCGAGGTTG GGGCTCACTC TCAAACATTT GAAAAATTCA TAGATTTTAT TGGTCTTAAG
TCGCTAATTA TTACTGATAT CGATAGTAAT AAAGAAGTTC CCAAGGATGA TGATCCAACT
AAAACAAAAA GGGAGAAGTG TCGTCCTAAC GAAACTGGCG CATCTCAAAC TTCAAATTCT
TCGTTAGAAT TTTTCTTTGG AACAAAGGAG TTGGATTTCT ATAAAACCTT GAGTTTTAGT
GGCAAAAGTT TAAGTAAATG CCCTGAGAAA AAATTATGGG AGCAAGATCA AGATGGACTA
ATTAAAATTG TCTATCAAGT AGAAGAAAAT AGTTACCTTG CGAGAAGTTT TGAGGATGCT
TTTTTCCATA TTAATAATGA ACTTCTAAAT ATTGGGCATG ATGCATTCCC ATCTTTGACT
AAGAAGCATT ATGATAAATA TCAAGCTGGT GATATCGATG TTTTTGAATT TGCTGAAAAG
GCTGTTAATA GCAAGCCTTC TCTAGCAATT GAAGTTTTAC TAAATAGTAA AACTTCAACT
TCTGATGGAG TTGAGTCAGA AGGTGATTCA AGAGAAATTG AATTTTCAAA CTGGAATGTG
CCGTTGTATA TCAAGGAAGG GCTACTATGG CTACAGCAGA ACTAG
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| Protein sequence | MKVARIEISN FRLLKSFTLD LEDELSLVIG KNNTGKTSVL ACLDKLAVQS DKKAISYEDF
NVDLMSSIEA VLLGEQTIGN EEEYSPLGIQ LKLFIKYSES DDLSKISSLI MSLDPVDDNV
VLSFEYKIAF DKIVDLKAAY ENDAEKFENS PRLFLKENLS DYFGPVVKKS LLKGDESQFI
DLNKENINLK DILSIQFINA KRSVTNKQND KTLSNQTSSL YKQVDESDEQ VDASNEFKKE
LRKTDTKLSG IYQNMFKDVI EKVNRFGGIS PTDTTIKVAS TLQHRELLEG NTTVMYQHQS
HDLPEHYNGL GYMNLISMIF EIEMLMSRLR KSLKEQPATI NLLFIEEPEA HTHPQMQYVF
IKNIKKLLKE NRIREDGIEI HLQSIITTHS SHIVSESSFD DIKYLKKEPQ SHQVQAKNLK
DLELEYSSKE DPEKDAELKQ SYRFLKQYLT LNRAELFFAD KAIFIEGDTE RVILPAMMKK
IDQENEVDNM QPLLSQNISM IEVGAHSQTF EKFIDFIGLK SLIITDIDSN KEVPKDDDPT
KTKREKCRPN ETGASQTSNS SLEFFFGTKE LDFYKTLSFS GKSLSKCPEK KLWEQDQDGL
IKIVYQVEEN SYLARSFEDA FFHINNELLN IGHDAFPSLT KKHYDKYQAG DIDVFEFAEK
AVNSKPSLAI EVLLNSKTST SDGVESEGDS REIEFSNWNV PLYIKEGLLW LQQN
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