| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003235 |
|---|
| Symbol | |
|---|
| ID | 8556968 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013456 |
|---|
| Strand | + |
|---|
| Start bp | 1795375 |
|---|
| End bp | 1796688 |
|---|
| Gene Length | 1314 bp |
|---|
| Protein Length | 437 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 646406330 |
|---|
| Product | type I restriction-modification system specificity subunit S |
|---|
| Protein accession | YP_003285860 |
|---|
| Protein GI | 262394006 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0732] Restriction endonuclease S subunits |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACTTGT TAACATCAAT GCCCAAACAT AATGAATATA CGGACACTGG TATAAGCTGG
TTAGGTTCTA TACCTTCTCA CTGGGAGGCG GCTCCTCTTT GTTCGGTATC AAAGCTGAAG
TCGATAACGA ACCATGTGGG TGAGCCATTA CTGTCCGTTT ACTTGGATAA AGGTGTAATT
CGATTTGATG AGGTTGAAGC GAAGCGAACG AATGTAACAA GTTTAGACCT TAGTAAGTAT
CAGTTAGTCG AACCGGGTGA CTTTGTCTTA AATAATCAAC AGGCATGGCG AGGCTCTGTT
GGTATTTCTG CTCATAGAGG AATCGTTAGC CCTGCATATT TGGTATTACA GTTATCATCA
AAAATTTATC CTCGTTTCGG AAATTATTTG TTCCGAGATG GGTCTATGGT GGCCAACTAT
CTTGTTAACT CAAAAGGTGT GGGAACTATT CAGCGAAATC TATACTGGCC TCAGCTAAAA
AGGGCATTAG TTTTTTTTCC GGGGCTTGAT GAGCAAATTG CAATTGCCAA CTATCTTGAT
GAAAAAACGT CGCAAATCGA TGAAGCTATC GCAATCAAAC AAAAGCAAAT AGAGTTGTTA
AAAGAGCGCA AGCAAATCAT CATTCAGCAA GCCGTTACGC AAGGTTTGAA CCCTGATGTG
CCAATGAAAG ATTCTGGCGT GGATTGGATT GGAAAAATTC CTGAGCATTG GACAGTATCT
AAGATTGGCC ACTACGCAAG AGTTTATAAT GGGTCAACAC CTAGTAGAGA TGTGAAAAGG
TATTGGGACG AAGGAACCAT ACCTTGGATG TCTTCCGGCA AAGTAAATGA CTATATAATT
TCCACTCCGT CAGAGTTGAT AACTACTGCG GCATTAAGAG AATGCTCTTT ACGTATCTTT
CCTAAAGGAA CAGTTCTGAT AGGGATTGTC GGTCAGGGGA AAACTAGAGG TACTTCAGCA
ATGTTGGCTA TTGATGCTGT TATAAATCAG AATGTTGCAG GCATAATTCC TTCAGAAAAA
ATTCTAAGTG AATTTTTACA TCAATATTTA ATTCAAGCTT ACGATGAAGT CAGAAATCAA
GGCCAAGGTT CAAACCAAGA AGCACTAAAC TGTCAAATAT TAAGCTCATT TAAGATTGCA
TTTCCTTCAA TTATCGAGCA AAAAGAAATA GTTCACTTTA TCGCCATACA ATCACAAAAA
TTAGATCAAT CTATAGATAT TCAATTTAAC CAAATAGAAA AACTTAAAGA ATACAAAACC
ACCCTGATCA ACAGTGCGGT TACAGGCAAA ATAAAAGTCA CGGAGCTGGT ATAA
|
|---|
| Protein sequence | MNLLTSMPKH NEYTDTGISW LGSIPSHWEA APLCSVSKLK SITNHVGEPL LSVYLDKGVI
RFDEVEAKRT NVTSLDLSKY QLVEPGDFVL NNQQAWRGSV GISAHRGIVS PAYLVLQLSS
KIYPRFGNYL FRDGSMVANY LVNSKGVGTI QRNLYWPQLK RALVFFPGLD EQIAIANYLD
EKTSQIDEAI AIKQKQIELL KERKQIIIQQ AVTQGLNPDV PMKDSGVDWI GKIPEHWTVS
KIGHYARVYN GSTPSRDVKR YWDEGTIPWM SSGKVNDYII STPSELITTA ALRECSLRIF
PKGTVLIGIV GQGKTRGTSA MLAIDAVINQ NVAGIIPSEK ILSEFLHQYL IQAYDEVRNQ
GQGSNQEALN CQILSSFKIA FPSIIEQKEI VHFIAIQSQK LDQSIDIQFN QIEKLKEYKT
TLINSAVTGK IKVTELV
|
|---|
| |