| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003161 |
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| Symbol | |
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| ID | 8556894 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 1736225 |
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| End bp | 1737742 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 646406256 |
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| Product | fumarate hydratase class I aerobic |
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| Protein accession | YP_003285786 |
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| Protein GI | 262393932 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
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| TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region
[TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGTAA TACGCAAGCA GGATGTGATC AGCAGTGTCG CTGATGCGCT ACAGTATATT
TCTTACTACC ACCCGCTAGA CTTTGTTCAA GCTCTTGAAA AAGCCTATCA CCGCGAAGAG
AGCCAAGCCG CTAAAGACGC GATTGCTCAG ATCCTAATTA ACTCCCGAAT GTCCGCAGAA
GGTCACCGAC CAATTTGTCA GGATACTGGT ATCGTGACGT GTTTCGTCAA CATCGGTATG
GGCGTGCAAT GGGACTCAAC CGACATGACG GTTCAGCAGA TGGTAGATGA AGGTGTTCGA
CAAGCGTATA CGAACCCAGA CAACCCGTTG CGTGCGTCAG TACTTATGGA TCCTGCCGGT
AAACGTATTA ATACCAAAGA CAACACGCCT GCTGTCGTAC ACATCAACAT GGTTCCGGGC
GATAAAGTTG AAATTCAGAT CGCAGCGAAG GGCGGCGGTA GTGAAAACAA AACTAAGATG
GTGATGCTAA ATCCATCTGA CGATATTGCT GAGTGGGTAG AAAAAACGCT ACCAACAATG
GGCGCGGGCT GGTGTCCACC AGGCATGCTT GGTATTGGTA TTGGCGGTAC GGCTGAAAAA
GCAGCAGTAT TGGCAAAAGA ATCTCTAATG GAACACATCG ATATTCAAGA GCTTATTGAC
CGTGGCCCAC AAAACGCAGA AGAAGAACTT CGTCTTGATA TCTTCAATCG CGTGAACAAA
CTTGGTATCG GTGCGCAAGG CCTTGGTGGT TTGACGACTG TTGTCGACGT TAAGATCAAA
ACGGCGCCAA CGCACGCGGC TTCTAAGCCT GTTTGTTTGA TCCCGAACTG TGCGGCGACT
CGTCACGTAC ACTTCACGCT TGATGGCAGC GGCCCAGCAG AGCTCACGCC ACCTAAACTA
GAAGATTGGC CAGACATTAC TTGGGAAGCG GGAGAAAACA CGCGTCGCGT AAACTTAGAC
ACGATTACTA AAGAAGAAGT ACAAGAGTGG AAGACAGGCG AAACCGTTCT TCTATCAGGT
AAAATTCTGA CTGGCCGTGA TGCTGCGCAT AAACGTATTC AAGGCATGCT AGATAATGGC
GAAGGTCTAC CAGAAGGCGT AGATCTAAAC GGTAAGTTCA TTTACTACGT AGGCCCTGTC
GATGCAGTTG GTGATGAAGT CGTTGGTCCT GCTGGCCCAA CAACATCAAC GCGTATGGAT
AAATTCACCG ATATGATGCT AGAAAAAACC GGCATCATGG GCATGATCGG TAAAGCTGAG
CGTGGCCCTG CAACGGTTGA ATCTATCAAG AATCACAAAG CGGTTTACCT AATGGCTGTC
GGCGGTGCTG CGTACTTGGT TGCGAAAGCG ATCAAGAAAG CTCGCGTTGT CGCATTTGAA
GATTTAGGTA TGGAAGCGAT TTACGAATTT GAAGTTGAAG ATATGCCAGT AACAGTGGCT
GTCGACTCAA ATGGCGTTAA CGCGCACCAA ATCGGTCCTG ACACTTGGAA AGTGAAAATC
CAAGAGATGG AAGCGTAA
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| Protein sequence | MTVIRKQDVI SSVADALQYI SYYHPLDFVQ ALEKAYHREE SQAAKDAIAQ ILINSRMSAE
GHRPICQDTG IVTCFVNIGM GVQWDSTDMT VQQMVDEGVR QAYTNPDNPL RASVLMDPAG
KRINTKDNTP AVVHINMVPG DKVEIQIAAK GGGSENKTKM VMLNPSDDIA EWVEKTLPTM
GAGWCPPGML GIGIGGTAEK AAVLAKESLM EHIDIQELID RGPQNAEEEL RLDIFNRVNK
LGIGAQGLGG LTTVVDVKIK TAPTHAASKP VCLIPNCAAT RHVHFTLDGS GPAELTPPKL
EDWPDITWEA GENTRRVNLD TITKEEVQEW KTGETVLLSG KILTGRDAAH KRIQGMLDNG
EGLPEGVDLN GKFIYYVGPV DAVGDEVVGP AGPTTSTRMD KFTDMMLEKT GIMGMIGKAE
RGPATVESIK NHKAVYLMAV GGAAYLVAKA IKKARVVAFE DLGMEAIYEF EVEDMPVTVA
VDSNGVNAHQ IGPDTWKVKI QEMEA
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