Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_003151 |
Symbol | |
ID | 8556884 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | - |
Start bp | 1723215 |
End bp | 1724840 |
Gene Length | 1626 bp |
Protein Length | 541 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 646406246 |
Product | methyl-accepting chemotaxis protein |
Protein accession | YP_003285776 |
Protein GI | 262393922 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00103096 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCTCAA CTATCACTTT TAAGCTCTTG CTCGCGTTAA TTGCCGTCTT CAGCTGTGTT CTGGCTGCCT CTACGGCTTA TCAATACCAT CAACAAAAAA CCTTAATCAA TGATGTTCTC AGTGAACAGC TTCATGATAA GGCCAGTAAT TACTTCGATA GCCTAAACAT GATGATGCTA ACAGGCACAA TGTCGCAAAA AGAAACTTTG CGAAAAAAAG CACTCGCTCA AGAAGGGATT GAAGAAGTTC GCGTGTTGCG GGCCGATACC GTAACCAAGC TTTACGGACC AGGACAAGCA AACCAACAAC CGGTCGATGA TATTGACCAA CGAGCTTTAA ATGGCGAACT GGTCATTGAG CCAATTTCAG CCAATTGGGG GAACGGACTA GTTGTCGCGC TACCAATGAA ATCAAGCGAA AATTATCGTG GCACCAACTG CGTTTCTTGC CATGTAGCAC CAGAAGGCGA AGTATTGGGC GCGATTCGTT TGGAATACAA CATGAACCAC GTCAATTCAA TGATCAATAA ACAGGCAATG TTTGCGATGG GAATAATGGC CGTTATCGCG TTTGTTGGTT TTATTATAAC GATGAGTTTG ATTCGTAAGA TCATTGTTCG CCCAATACAA AAAACGTCGC AATTCATGGC GAATGTGAGC CATAGTAAAG ATCTATCTCA ACGACTTGTT CATCACCAAA AAGATGAGGT AGGCCAACTT TCTACCGCGA TTAATTCGTT TATGGATACG GTATCCGAGA GTTTAGAGCG TGTACAAGAC ACCTCCCACT CTCTTGCCAA TTCAGCCAGT CAGTTAACGG ATGTTGCACA ATCAACAGAC AAAGCGGCCA ATAATCAACA ATTGGAAACC AGTGACGTAC AAAGCAACAT CACCGACATG TTGCAACAAC AAACCGCCGT TGAAGACTCG ACCAATAACG CCACAGCTCT AGTCAACCAT ACCGTTGATG TTGCCACTCA CAGCGCAAGC CAAGCACACA GCGTGAGCGA AGACATCAAA CACTTGGTGA GCAATATTGA CGGCGTACGG GAAAAAATCA GTTCGTTAAA CCAAAGAACC GAAGAAGTAT CATCCATTCT TGGGGTCATT AAAGGCATTG CAGAACAAAC CAACCTGCTC GCGTTGAATG CTGCAATTGA AGCCGCCCGA GCCGGAGAGC AAGGACGCGG TTTTGCCGTC GTCGCGGAGG AAGTGCGTAA CCTAGCTTCT CGGACCGCCG AAGCCACAGG CAACATTGAG CATATCATTT CTCAATTCCA GCAAGGGAGT GAAGAGTCCT TAGCCTCTGT GGATACTGTC TGCCAGTTTG CTCACCAACG TTCCGTCGAT GTCGAGACAC TTTCAGTCAC GATGCATAAC GTTGTCGATG AAATGCATCA AGTTCTGAAA CATGCGGAAA ACATTCAAAG CCAGACGCAA ACCACATCCG ACGTCAGTCA GCGTATTCAA TCCAAAATTG ATGTGATCAC ACTGCATGCT GACGACACAT CGCAATCAGC ATCGCACACG CGTGATATTA GTGTTGATTT AGAGCATCTA TCCGAACGTT TAGAGCAATT ACTTAACCAA TTCACACTTT CAGAGCATCA AAGAGTGAAT AAATAG
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Protein sequence | MRSTITFKLL LALIAVFSCV LAASTAYQYH QQKTLINDVL SEQLHDKASN YFDSLNMMML TGTMSQKETL RKKALAQEGI EEVRVLRADT VTKLYGPGQA NQQPVDDIDQ RALNGELVIE PISANWGNGL VVALPMKSSE NYRGTNCVSC HVAPEGEVLG AIRLEYNMNH VNSMINKQAM FAMGIMAVIA FVGFIITMSL IRKIIVRPIQ KTSQFMANVS HSKDLSQRLV HHQKDEVGQL STAINSFMDT VSESLERVQD TSHSLANSAS QLTDVAQSTD KAANNQQLET SDVQSNITDM LQQQTAVEDS TNNATALVNH TVDVATHSAS QAHSVSEDIK HLVSNIDGVR EKISSLNQRT EEVSSILGVI KGIAEQTNLL ALNAAIEAAR AGEQGRGFAV VAEEVRNLAS RTAEATGNIE HIISQFQQGS EESLASVDTV CQFAHQRSVD VETLSVTMHN VVDEMHQVLK HAENIQSQTQ TTSDVSQRIQ SKIDVITLHA DDTSQSASHT RDISVDLEHL SERLEQLLNQ FTLSEHQRVN K
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