| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003138 |
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| Symbol | |
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| ID | 8556871 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 1709988 |
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| End bp | 1711340 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646406233 |
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| Product | High-affinity choline uptake protein BetT |
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| Protein accession | YP_003285763 |
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| Protein GI | 262393909 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000429409 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTTCATTA TTGCAGGTAA TATTTTCGTT ATTTTCTGTT TGGCACTTAT CGTTTCGCCA
ATGGGTAAAA TCCGCCTAGG TGGTAAAGAC GCTGTTGCCG ATTACTCGTT CATGTCATGG
CTTGCAATGC TATTTGCGGC TGGTATGGGT ATCGGTTTAA TGTTCTGGAG TGTCGCAGAA
CCTGTCGCTT ACTTCACTGG TTGGTATGAA ACGCCACTCG GTGTTGAAGC AAACACACCA
GAAGCAGCGA GATTGGCACT GGGTGCGACG ATGTTCCACT GGGGTCTTCA CCCATGGGCA
ATTTACGGTG TTGTAGCACT TTCTTTAGCA TTCTTTGCCT ACAACAAAGG TTTACCGCTT
TCTATGCGCT CGATCTTCTA CCCGCTTCTG GGTGATCGCG CGTGGGGCTG GGCTGGTCAT
ATCGTGGATA TCTTGGCCGT TCTTGCGACC TTGTTTGGTC TTGCAACGTC ACTGGGCTTA
GGTGCACAAC AAGCGGCAAG TGGTATTCAT CACGTATTTG GTGTTGAGCC AGGCCTGGGC
CTACAAATCG TCGTCATTAC CGTTGTAACT TTGCTTGCTG TTGTTTCAGT GGTACGTGGT
ATTGATGGTG GCGTTAAAGT CATTAGTAAC ATCAACATGG TCGTGGCGTT CTTGCTACTG
ATTCTTGTTG GTCTTATCGG TTGGGCGGCG AGTCTAGGTT CGATTCCAAC CACACTTATG
GCATACGTAG AGAATATTAT TCCGCTAAGT AACCCGTTTG GTCGTACAGA TGAGGCATGG
TTCCAAGGCT GGACAGTATT CTACTGGGCT TGGTGGATTT CATGGTCACC ATTCGTAGGT
ATGTTCATTG CGCGTGTTTC TCGCGGTCGT ACCGTTCGTG AATTCATTAC AGCCGTTCTA
CTGGTTCCAA CCGCTGTTAC TGTTGTTTGG ATGTCAGTAT TTGGTGGTCT AGCGATCGAG
CAAGTTGTTG ATAAAGTAGG TGAGTTGGGC ACGAATGGTT TGACTGACGT TTCACTTGCT
ATGTTCCAAA TGTTCGATGT TCTTCCATTT GGTAGCATGC TTTCAATCAT TGCTGTTGTG
TTGGTACTTG TGTTCTTCAT CACGTCTTCT GACTCTGGTT CACTTGTTAT CGACAGCATC
ACAGCGGGCG GTAAAGTCGA CGCTCCTGTA CTTCAACGTG TTTTCTGGGC ATTTATGGAA
GGTGCAATTG CGGTTGCTCT ACTGTGGATT GGTGGCTCAG AAGCAGTTCA AGCGCTTCAG
GCTGGTGCAA TTTCTACAGC ACTACCGTTT ACCTTCATTC TGCTTGCAAT GTGTGTGAGC
TTATTGATGG GTATGAGAAC AGAACGTCAA TAA
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| Protein sequence | MFIIAGNIFV IFCLALIVSP MGKIRLGGKD AVADYSFMSW LAMLFAAGMG IGLMFWSVAE
PVAYFTGWYE TPLGVEANTP EAARLALGAT MFHWGLHPWA IYGVVALSLA FFAYNKGLPL
SMRSIFYPLL GDRAWGWAGH IVDILAVLAT LFGLATSLGL GAQQAASGIH HVFGVEPGLG
LQIVVITVVT LLAVVSVVRG IDGGVKVISN INMVVAFLLL ILVGLIGWAA SLGSIPTTLM
AYVENIIPLS NPFGRTDEAW FQGWTVFYWA WWISWSPFVG MFIARVSRGR TVREFITAVL
LVPTAVTVVW MSVFGGLAIE QVVDKVGELG TNGLTDVSLA MFQMFDVLPF GSMLSIIAVV
LVLVFFITSS DSGSLVIDSI TAGGKVDAPV LQRVFWAFME GAIAVALLWI GGSEAVQALQ
AGAISTALPF TFILLAMCVS LLMGMRTERQ
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