| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003114 |
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| Symbol | |
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| ID | 8556847 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 1685580 |
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| End bp | 1687007 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 646406209 |
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| Product | cytochrome c552 precursor |
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| Protein accession | YP_003285739 |
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| Protein GI | 262393885 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3303] Formate-dependent nitrite reductase, periplasmic cytochrome c552 subunit |
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| TIGRFAM ID | [TIGR03152] formate-dependent cytochrome c nitrite reductase, c552 subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCATAA AACACTGGAT GAGCGCACCT ATCGCGGTTG CGACCTTATT CGCCAGCCAA
TTATTTTTGG TTGGTGCTCC TTTGGCGGCA GAGGATACTG GTCTCATAGA GCCTCGCAAT
GATACCTTTG AACAAAACCA TCCTGACCAA TATCACTCTT GGAAAGCCAC ATCGGAAAGC
GAGCATATTG AAGATGCCTT AAGTGAAGAC CCAAACATGG TGATCTTGTG GGCTGGTTAT
GGTTTTGCTA AAGACTACAA CAAAGCGCGC GGTCACTTTT ACGCGCTTGA TGATGTGAGG
CAAACCCTCA GAACTGGCGC ACCAGCAGAC GAAAACTCCG GGCCAATGCC GATGGCTTGT
TGGAGTTGTA AAAGCCCAGA TGTCGCCCGC GTAATTGAAG AGCGCGGTGA AGACGGCTAT
TTTGAAGGTA AATGGGCGCG CTTGGGCTCA GAAATCGTCA ACCCTATCGG TTGTTCCGAC
TGTCACAGTA CGGGTTCTGA AGCCTTCAAG AAAGGCGAAC CCGCACTGGC ACTGACTCGC
CCATACGTCG AGCGTGCTTT TGACACCATC GGCAAAAATT TTGACCAACA ATCTCGCTTA
GATAAACAAG CGTCAGTCTG CGCTCAATGT CATGTCGAGT ACTACTTCAC AGGTCCGACT
AAAGCAGTCA AATTCCCATG GGACATGGGG ACCAACGTCG CTGATATGGA GAAATACTAC
GACGCGTTGA ACTTTAAAGA TTGGACGCAC GCCGTTTCTA AAGCACCAAT GCTTAAGGCG
CAACACCCAG GTTTCGAAAC TTGGAGAGCG GGTATTCATG GCAAAAACAA AGTGGTGTGT
GTGGACTGTC ACATGCCTAA AGTAACCAAA GAAGACGGTA CGGTATACAC TGACCACAAA
GTGGGTAACC CGTTTGATCG TTTTGAAGAC ACCTGTGCGC AATGCCATAC TCAAACCAAA
GAGCAGCTAC AAGGCATCGT TTCGACTCGC AAAGCGCAAG TACTAAACAT GAAGCTAACC
GCCGAGAAGC AAATTGTGGC AGCGCACTTT GAAGCTGGTG CAGCATGGGA AGCAGGGGCA
ACAGAAGAAG AGATGCAACC TATCCTACAA GATATTCGCC ATGCACAATG GCGTTGGGAC
TACGCGATTG CTTCTCACGG TGTTCACATG CATGCTCCTG AGGTAGCACT TGAAGTACTC
GGTACCGCAG TTGATCGCGC TGCTGACGCT CGTACTAAGT TAGTTCGTTT ACTGGCAACA
AAAGGTATTA CTGACCCAGT TCAAATTCCA GATATCTCGA CCAAAGCAAA AGCGCAACAA
GCACTAGGTA TGGATATGGA AAAGATGAAC GCAGACAAGA AACACTTCCT AGAAACGGTG
GCACCAGAAT GGGATAAAGC AGCTGCTGAG CGCGAAGCAA CGTACTGA
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| Protein sequence | MSIKHWMSAP IAVATLFASQ LFLVGAPLAA EDTGLIEPRN DTFEQNHPDQ YHSWKATSES
EHIEDALSED PNMVILWAGY GFAKDYNKAR GHFYALDDVR QTLRTGAPAD ENSGPMPMAC
WSCKSPDVAR VIEERGEDGY FEGKWARLGS EIVNPIGCSD CHSTGSEAFK KGEPALALTR
PYVERAFDTI GKNFDQQSRL DKQASVCAQC HVEYYFTGPT KAVKFPWDMG TNVADMEKYY
DALNFKDWTH AVSKAPMLKA QHPGFETWRA GIHGKNKVVC VDCHMPKVTK EDGTVYTDHK
VGNPFDRFED TCAQCHTQTK EQLQGIVSTR KAQVLNMKLT AEKQIVAAHF EAGAAWEAGA
TEEEMQPILQ DIRHAQWRWD YAIASHGVHM HAPEVALEVL GTAVDRAADA RTKLVRLLAT
KGITDPVQIP DISTKAKAQQ ALGMDMEKMN ADKKHFLETV APEWDKAAAE REATY
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