Gene VEA_003110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_003110 
Symbol 
ID8556843 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp1680243 
End bp1680971 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content44% 
IMG OID646406205 
Product3-demethylubiquinone-9 3-methyltransferase 
Protein accessionYP_003285735 
Protein GI262393881 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase 
TIGRFAM ID[TIGR01983] ubiquinone biosynthesis O-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.35235 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAATGCAA TAAAACCAAT TATGACTAAA GCACAAAACG TCGACCCAAG TGAAATTAAG 
AAATTCGAGG ACATGGCTTC TCGATGGTGG GATTTAGAAG GCGAGTTTAA GCCGCTTCAT
CAAATTAACC CACTTCGTTT GAACTATGTA CTTGAAAAAG CAAATGGCTT GTTTGGCAAG
CGTGCACTTG ATGTCGGCTG TGGTGGTGGC ATTCTTGCTG AAAGCATGGC GAAAGAAGGC
GCTATTGTTA CTGGACTTGA TATGGGCAAA GAACCTTTAG AAGTCGCACG ACTACATGCA
TTAGAAACCG GTACTCAACT GACCTACATT CAGAGCACAA TAGAAGACCA CGCTATAGAA
AACGCAGGGA CTTACGATGT CGTGACTTGT ATGGAGATGC TTGAACACGT TCCAGATCCT
CTCTCCGTTA TCCGCTCTTG TGCTGCGCTA GTAAAACCTG GTGGTCACGT GTTTTTCTCA
ACCTTGAACC GAAACATCAA GTCATACTTG TTTGCTATTG TCGGTGCAGA GAAGCTTCTT
AAGATTGTTC CTGAGGGGAC TCACGAGCAC GAGAAGTTTA TCAAGCCTGC CGAAATGATG
AAGATGATAG ACCAAACAGA CCTGACGGAA ATGGGCATTA CGGGGCTTCA TTACAACCCT
CTAAATGACA GCTACAAACT CGGTCGTAAT GTAGATGTAA ACTACATCGT TCATACTAAA
AAATACTGA
 
Protein sequence
MNAIKPIMTK AQNVDPSEIK KFEDMASRWW DLEGEFKPLH QINPLRLNYV LEKANGLFGK 
RALDVGCGGG ILAESMAKEG AIVTGLDMGK EPLEVARLHA LETGTQLTYI QSTIEDHAIE
NAGTYDVVTC MEMLEHVPDP LSVIRSCAAL VKPGGHVFFS TLNRNIKSYL FAIVGAEKLL
KIVPEGTHEH EKFIKPAEMM KMIDQTDLTE MGITGLHYNP LNDSYKLGRN VDVNYIVHTK
KY