Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_003102 |
Symbol | |
ID | 8556835 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | + |
Start bp | 1670241 |
End bp | 1671485 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 646406197 |
Product | carboxynorspermidine dehydrogenase putative |
Protein accession | YP_003285727 |
Protein GI | 262393873 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1748] Saccharopine dehydrogenase and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.185885 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAATTC TACAGATTGG TGCAGGCGGC GTTGGCTGGG TAGTTGCACA TAAAGCAGCA CAAAACAACG ACGTTCTGGG TGATATCACA ATCGCATCAC GTACCGTAGG TAAGTGTGAG AAAATCATCG AATCGATTCA GAAGAAAAAC AATCTGAAAG ATTCAACTAA GAAACTAGAA GCTCGTGCGG TAAACGCGGA CGACGTAGAT TCTTTAGTTG CTTTAATTAA AGAAGTGCAG CCTGACTTAG TGATCAACGC GGGTCCTCCT TGGGTGAACA TGTCTATTAT GGAAGCATGT TACCAAGCTA AAGTGTCATA CCTTGATACA TCTGTTGCGG TTGATTTGTG TTCTGAAGGC CAACAAGTAC CTCAAGCTTA CGATTGGCAG TGGGGCTACC GTGAGAAGTT TGAAGAGGCG GGTATCACAG GTATTCTTGG TGCCGGTTTC GATCCGGGCG TAGTATCGGT GTTTGCCGCA TACGCAGTGA AGCATCTGTT CGATGAAATC GATACTATCG ACGTAATGGA TGTCAACGCA GGCGACCACG GCAAGAAGTT CGCAACTAAC TTTGATCCAG AAACGAACAT GCTTGAGATT CAAGGTGATT CCTTCTACTG GGAAAACGGC GAGTGGAAAC AAGTACCTTG TCACTCACGT ATGCTTGAGT TTGAATTCCC GAACTGTGGT TCACATAAAG TGTACTCAAT GGCGCACGAC GAAGTTCGAT CTATGCAAGA GTTCATCCCG GCGAAACGTA TCGAATTCTG GATGGGCTTT GGTGATCGTT ACCTAAATTA CTTCAATGTA ATGCGTGACA TCGGTCTACT CAGCCCAGAT CCACTAACAC TGCACGACGG CACGGTTGTT CAACCTTTGC ACGTGCTTAA AGCGTTGCTG CCAGATCCAA CATCACTAGC TCCTGGTTAC ACTGGCCTAA CGTGTATCGG TACTTGGGTT CAAGGTAAGA AAGACGGTAA AGAGCGCAGT GTGTTCATCT ACAACAACGC AGATCACGAA GTTGCATACG AAGATGTTGA ACACCAAGCT ATCTCATACA CCACTGGCGT ACCTGCGATC ACCGCGGCTT TGCAGTTTTT CCGTGGTAAG TGGGCAGACA AAGGCGTGTT CAACATGGAG CAGCTAGATC CAGACCCATT CCTAGAAACC ATGCCATCGA TTGGTCTAGA TTGGCATGTT CAAGAACTGG AGCCAGGACA ACCTGTTATC CATAAATTGA AGTAA
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Protein sequence | MAILQIGAGG VGWVVAHKAA QNNDVLGDIT IASRTVGKCE KIIESIQKKN NLKDSTKKLE ARAVNADDVD SLVALIKEVQ PDLVINAGPP WVNMSIMEAC YQAKVSYLDT SVAVDLCSEG QQVPQAYDWQ WGYREKFEEA GITGILGAGF DPGVVSVFAA YAVKHLFDEI DTIDVMDVNA GDHGKKFATN FDPETNMLEI QGDSFYWENG EWKQVPCHSR MLEFEFPNCG SHKVYSMAHD EVRSMQEFIP AKRIEFWMGF GDRYLNYFNV MRDIGLLSPD PLTLHDGTVV QPLHVLKALL PDPTSLAPGY TGLTCIGTWV QGKKDGKERS VFIYNNADHE VAYEDVEHQA ISYTTGVPAI TAALQFFRGK WADKGVFNME QLDPDPFLET MPSIGLDWHV QELEPGQPVI HKLK
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