Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_003092 |
Symbol | |
ID | 8556821 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | - |
Start bp | 1655425 |
End bp | 1656135 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 646406183 |
Product | hypothetical protein |
Protein accession | YP_003285717 |
Protein GI | 262393863 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0245591 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCTATGC TAAATCTAGA CCTAAATTGG ATTTTTGGGA CATCTCAAGA TGACGATATG ACCGGTACAA AAGGGTCTGA AACAACCGAT ATTTTCTTCG GCTTCTGTGG TGATGATAAG TTCGTAGGAT ACGGAGGCAA TGATGTTGTC TTCGGGGGCT GGGGAGACGA TACCTTGCTC GGTGGCCGAG GAAACGACTT TGTTTCTGGC GGCTTTGGCA ACGACTTCCT ATCGGGCGGA TTAGGAAATG ACAAGCTCTT TGGTGGCTGT GGCGATGATA CAATTTTTGA TTACTCAGGT AACAACTACT TGAGTGGGGG TTGGGGTAAC GACACGCTCG TCGTTGGCGA TGGTGAATCA GTACTGAGCG GCGGCTGTGG AGACGACACT TTTGTGCTTA CAAACCGCCT GGCTATTGGC GTACCCGATC AACCTGTATC TTCCAACGAT ATTGATATTA AAGCCGATAT TGTCGATTTT AATATTTTTC ATGACAAACT TGTCTTCGAT ATGGGCAGAG ACACCGACAA TGATGGCATT CGCGATACGT TCTTAGATTC AGCGGATGAT CTGACTTTAT CTTATAATGA GTGTGGCTGG GCAGTATTCT CTAGTGATGA ATACAATGTT GAAGTGACAC TAAACGGCGT GAGCTCTGCA TACATCAACT ATGCTGAACA AAATGGTATC GACATTTTCG ATTTCGCTTA A
|
Protein sequence | MSMLNLDLNW IFGTSQDDDM TGTKGSETTD IFFGFCGDDK FVGYGGNDVV FGGWGDDTLL GGRGNDFVSG GFGNDFLSGG LGNDKLFGGC GDDTIFDYSG NNYLSGGWGN DTLVVGDGES VLSGGCGDDT FVLTNRLAIG VPDQPVSSND IDIKADIVDF NIFHDKLVFD MGRDTDNDGI RDTFLDSADD LTLSYNECGW AVFSSDEYNV EVTLNGVSSA YINYAEQNGI DIFDFA
|
| |