| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003091 |
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| Symbol | |
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| ID | 8556820 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 1654700 |
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| End bp | 1655320 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646406182 |
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| Product | YrdC family protein |
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| Protein accession | YP_003285716 |
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| Protein GI | 262393862 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0009] Putative translation factor (SUA5) |
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| TIGRFAM ID | [TIGR00057] Sua5/YciO/YrdC/YwlC family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0373896 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCCAGT TTTTTTACGT TCACCCAGAA AACCCACAGG CTCGCTTGAT TAATCAAGCA
GTAGCAATCA TTCGTAACGG CGGCGTTGTG GTGTACCCTA CCGATTCAGG GTACGCACTT
GGCTGTCAGT TGGAGAACAA ACAGGCACTG GAACGAATCT GTCAGATCCG TCGTCTCGAT
GATAAGCATA ACTTTACTTT ATTGTGTCGT GATTTGTCGG AGCTTTCTCT ATATGCGCGA
GTAGATAACT CTGCATTCCG ACTACTGAAA AACAACACAC CAGGTCCTTA CACCTTCATC
TTCAAAGGCA CGAAAGAAGT GCCGCGTCGT TTGATGAACG CGAAACGTAA GACCATCGGT
ATCCGTGTTC CAGACAATCA AATTGCCTTG GACTTGTTGG AAGCATTAGG TGAACCGATG
ATGTCTACGT CGTTGATTCT ACCTGGCAGT GACGTAACAG AGTCTGATCC GGAAGATATT
CGCGATAAAC TAGAACATGC GGTTGATGTG ATTCTTAATG GCGGTTACTT AGGTGAACAA
CCTACGACCG TCATTGACTT TAGCGAAGGT GAACCTGTTG TGGTGCGTTT GGGATCAGGT
GACCCGGCAC CATTCGAATA A
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| Protein sequence | MSQFFYVHPE NPQARLINQA VAIIRNGGVV VYPTDSGYAL GCQLENKQAL ERICQIRRLD
DKHNFTLLCR DLSELSLYAR VDNSAFRLLK NNTPGPYTFI FKGTKEVPRR LMNAKRKTIG
IRVPDNQIAL DLLEALGEPM MSTSLILPGS DVTESDPEDI RDKLEHAVDV ILNGGYLGEQ
PTTVIDFSEG EPVVVRLGSG DPAPFE
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