Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_003003 |
Symbol | |
ID | 8556733 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | + |
Start bp | 1550484 |
End bp | 1551251 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 646406096 |
Product | putative deoxyribonuclease YcfH |
Protein accession | YP_003285630 |
Protein GI | 262393776 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0084] Mg-dependent DNase |
TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCGTAG ATTCTCATTG TCATTTAGAC AAATTGAATT ACGACGATCT CCACATCAAT GTGGAAGACG TTATTAACAA AGCTAAACAA GCAAAGGTAA CCGAGCTGCT TTCTGTGGGA GTTACGCTGG ATTCTTTCCC TAAAATGATG GAAATGATTG AGCCTTATGA GAATGTTTAT GCTTCGTGCG GTGTACACCC ACTTGATGTT GAAAGCGACT TTTCGATGGA CGTGCTACGT CACCACGCAT CGAATGAAAA AGTCGTTGCC ATTGGTGAAA CAGGCTTGGA TTATCATTAT AAGCCAGAAA CGGCAGCGTT ACAGAAAGAG CGTTTTGAGC AACACGTTGA TCTTGCGGTG GAGCTTAACA AACCTTTAAT TATCCATACT AGAAACGCAC GTGCGGATAC TCTAGATATT TTGCGTAAGG GTGGGGCGGA GAAATGTGGT GGTGTTATCC ACTGTTTTAC AGAAGATCTT CCATTTGCTG AAGCTGCACT TGAGCTGGGG TTTTATATTT CTATCTCGGG GATTGTCACT TTCCGTCAAG CTACAGAGTT GAAAGAAGTG GTGAAGACTC TACCTCTAGA GAAGCTTCTC ATTGAGACAG ATTCTCCTTA CTTGGCTCCA GTCCCTCACC GAGGTAAAGA GAATCAACCT GCTTATGTTG TCGAGGTGGC TTCTTATATT GCGCAACTCA AATCGTGCTC TCTTTCTGAA GTGGCACAAA AAACCACCGA AAATTTCCGA AATCTTTTTT TGCGATGA
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Protein sequence | MFVDSHCHLD KLNYDDLHIN VEDVINKAKQ AKVTELLSVG VTLDSFPKMM EMIEPYENVY ASCGVHPLDV ESDFSMDVLR HHASNEKVVA IGETGLDYHY KPETAALQKE RFEQHVDLAV ELNKPLIIHT RNARADTLDI LRKGGAEKCG GVIHCFTEDL PFAEAALELG FYISISGIVT FRQATELKEV VKTLPLEKLL IETDSPYLAP VPHRGKENQP AYVVEVASYI AQLKSCSLSE VAQKTTENFR NLFLR
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