Gene VEA_002973 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_002973 
Symbol 
ID8556703 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp1515356 
End bp1517182 
Gene Length1827 bp 
Protein Length608 aa 
Translation table11 
GC content43% 
IMG OID646406066 
Productmaltodextrin glucosidase 
Protein accessionYP_003285600 
Protein GI262393746 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0366] Glycosidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCTGC CATTTATTTT TCATAGTCAA ACTATTGATG GTTTAGCTTT TAATCAAGAG 
CAAGTAACAT TCAGACTGAA AACCGAGACA TTGGATTTTG ATTCCGTATA TGTGCGTCTT
GAGCCGGACA ATGAAGAATA TCTGGTCGAC ATGGCTCAAA TTGGAACAGC TGGGGAATTG
TTACTATGGG AAGCATCGTT CCGACCAAAT CGAGATCAAG ATGTCACACA TTATGTGTTT
AAGCTCCTCA AAGACGGACA ACAATACTGG CTCGATGCAC GAGGCGTACA AAAGCGTATT
CCACCCAAAG AGTTCCACTT TAAGTTGAAT GTAAACCATC AACCACCAAG CTGGGTCCAA
GAGCAAGTGT TCTATCAAAT CTTTCCTGAC CGTTTTTCTG CTAGTAAAAG TGAATCTGAC
ATTCGTAAAG CTTATGCTCA GCATGATTCA GAAGCGATCA TTAAATCGTG GGGAGACGCG
GTAGGCTCTC ACAAAAATAC AGGAGCAAGA GAGTTTTTTG GCGGCGATCT CAAAGGTGTA
GAGCAGAGGT TGGATTACCT TGAGCAGCTC GGCGTAACAG CGCTTTACTT CAATCCGATT
TTTTCTTCAC CAAGTAACCA CAAATACGAC ACTACGGATT ACTTCACTGT TGATCCTATG
TTTGGCACCA ATGCTCAGTT TGCAGAACTG TGTGAGAAGA TTTGTGGTAA GAATATGAAG
ATTGTCTTAG ACGCGGTGTT TAACCACACG TCAGTGCATC ATCCTTGGTT TGATATCCAA
CAAAAAGGAG AAGGGGCGTA TGGCAATCCG CAGTCAAAGT TCCGCGATTA CTACTTTTTC
GAAGACGAAA CCAATCATTA TATCGGTTGG AAGGGTATTG GAAACTTACC GGTTCTGAAC
TTCGAAAATG AACAAGTGCG TGACTATATC TATCAAAGCG AAGAATCTGT CATTAAGCAC
TGGCTTAACC CTCCATACTC AGTCGATGGT TGGCGATTTG ATGTTATCCA TATGCTTGGC
GAAGGAGAGG GAGCGAAAAA CAATGCTCAT TATGTTGAAG CGTTTCGCCA TGCGACGAAG
TCAGTCAATC CGAATGCCTA TGTGCTAGGT GAGCACTTTT TTGAAGCAAC GCAGTGGTTG
CAAGGTGATC AAGAGGATGG GGCGATGAAC TACTACGGTT TTGCTCATCC AGTTCGAGCT
TTTATCGCGC AGCAAGATAT TATGTATGAA CCAATCAACA TTGATGGTTT GGAGTTTAAA
GCATGGTTGG ACGAAGCCAG AGCAAAAATT CCATTTTCGA ATCAGCTATC GCAGCTAAAT
CAACTCGATA GTCATGATAC TGCTCGTTTT ATCACACTGG TTGATGGTGA TAAGCGTAAA
ATGAACATCG CACTTGCTCT GCTCATGACA TACGTCGGTA CACCTTGTAT TTACTATGGG
AGTGAAGTCG GACTAGAGGG AGGGCTGGAC CCGGATAATC GTCGCTGTTT CCCTTGGAAT
GAAATTGAAA ACTCAGCATG GCTGTCGATT TACAAGCAAT GGATTTCGAT ACGTAAACAG
TACAAGTCTT TACAGTCTGG TAGTATTCAA TGGCTGCATT GTGATACCAA CGTGCTGGCT
TATGCGCGCG TACTTGGAAG TGAAGCGATC GTTGTTGTGA TGAATCTAAG TGGCGATGAG
TGTTCAATTG ACTTGCCTCT GTGGCAACTT GGTTTGGAGG CTACCCATCT TTCGTCACTT
CTGGATGTAC GCGAACTTAT TGATTATAAG GGTCATCTTT CTGTCAATAT ACCTGCACAG
AGCTTCAAAT TGTGGCAACT GAAGTGA
 
Protein sequence
MNLPFIFHSQ TIDGLAFNQE QVTFRLKTET LDFDSVYVRL EPDNEEYLVD MAQIGTAGEL 
LLWEASFRPN RDQDVTHYVF KLLKDGQQYW LDARGVQKRI PPKEFHFKLN VNHQPPSWVQ
EQVFYQIFPD RFSASKSESD IRKAYAQHDS EAIIKSWGDA VGSHKNTGAR EFFGGDLKGV
EQRLDYLEQL GVTALYFNPI FSSPSNHKYD TTDYFTVDPM FGTNAQFAEL CEKICGKNMK
IVLDAVFNHT SVHHPWFDIQ QKGEGAYGNP QSKFRDYYFF EDETNHYIGW KGIGNLPVLN
FENEQVRDYI YQSEESVIKH WLNPPYSVDG WRFDVIHMLG EGEGAKNNAH YVEAFRHATK
SVNPNAYVLG EHFFEATQWL QGDQEDGAMN YYGFAHPVRA FIAQQDIMYE PINIDGLEFK
AWLDEARAKI PFSNQLSQLN QLDSHDTARF ITLVDGDKRK MNIALALLMT YVGTPCIYYG
SEVGLEGGLD PDNRRCFPWN EIENSAWLSI YKQWISIRKQ YKSLQSGSIQ WLHCDTNVLA
YARVLGSEAI VVVMNLSGDE CSIDLPLWQL GLEATHLSSL LDVRELIDYK GHLSVNIPAQ
SFKLWQLK