| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002966 |
|---|
| Symbol | |
|---|
| ID | 8556696 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013456 |
|---|
| Strand | + |
|---|
| Start bp | 1506351 |
|---|
| End bp | 1507628 |
|---|
| Gene Length | 1278 bp |
|---|
| Protein Length | 425 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 646406059 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003285593 |
|---|
| Protein GI | 262393739 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3174] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATATCA ATGAGTTTGT CAGTGGCGAG CATCTAATTT GGAATCTGCT TATTGCTCTA
TTACTGGGGG CAATTGTTGG CACCCAACGT GGCTGGGTGA TGCGCAATAG CGTAGAAGGC
AGTCGTGTCG CGGGCATTCG TACTTTTTCT TTAGTCGGTT TACTCGGTGG TTTAGTTGGT
ATTCTCGCCA ACATCTATTC ACCTTTACTC ATTGGTTTTG CGCTTATCGC TTTAGTCATC
CTCACTTGCA TCGCTTTTGT TATACAGCAG AAAAAGAGCG GAGATGTGAG CATCACTGGC
GTGGTTAGTA TCATGGTGGT GTTTGTTCTG GGTAACCTTG CCGTGTCGGG TGAGGCTGTT
TTGGCAGCAG CAGCGGCCGT CATAACCGCG GTAGTGCTCG ATAACAAAAG AGAGCTACAT
CAAGCGCTAC AAAAACTGCA AGAGTATGAG TTAGACGCAG CACTGCGTTT ATTACTTATC
TCGATAGTCA TGTTACCACT CTTACCAAAT CAATCTTACG GCCCTTGGAA TGCACTTAAC
CCGTATGAGA TTTGGTGGAT GGTTGTGCTG ATCGCTAGTA TCTCGTTTGT CGGTTATTTT
GCGATAAAGA TCGGCGGGGC GAAGCGAGGT ATTTTGTTTA CGTCTGTATT TGCTGGTCTT
AGCTCTTCGA CAGCATTAAC GTTGCAGTTT TCCCATCTTT CTCGTGAGCA AGCGAGCATC
AGCCCGTTAC TCGCTAGTGG TATTCTTTTG AGCTGCGGAA CCATGTTCCC TCGTTTACTT
ATCGTACTGT CCGTTATCAA TCCACAATTA GTGAAACTGC TTTGGCCAAT TGTGATGGCG
ATGATGGTTG CGCTGTACAT TCCGGCATGG TGGATTTGGC GCAAAAGTGA AGTTGAGCAG
ATTGAGCAAT CAAATAAGCA AACGAACCCT CTTGCTTTGC AGTCGGCACT GTTCTTTGGC
CTCGTGTTGG CGGTGATTAT GCTGCTCGCT CACGCTTTGT CTGACTGGTT CGGCAATGCG
GGGGTGTTGA TCCTTTCTGC TTTATCAGGG ATTACTGACG TTGATGCGAT CTCGTTAACC
CTCGGACGTC AAAGTACGAA AACATTAAGC GTGACCACTG CTGCATTAGG CATTTTGATT
GCCGCTTCGG TTAATACCAT TGTGAAAATG GGGATGGTCA TCGCGATAGG GGATAAGAAG
CTTTGGCACC GAATCGCACC AGTGATGACA GGTTGTGTTG TGGTTGGGGC TGGGGTATTT
ATGGCGCTGT ATTCTTAA
|
|---|
| Protein sequence | MDINEFVSGE HLIWNLLIAL LLGAIVGTQR GWVMRNSVEG SRVAGIRTFS LVGLLGGLVG
ILANIYSPLL IGFALIALVI LTCIAFVIQQ KKSGDVSITG VVSIMVVFVL GNLAVSGEAV
LAAAAAVITA VVLDNKRELH QALQKLQEYE LDAALRLLLI SIVMLPLLPN QSYGPWNALN
PYEIWWMVVL IASISFVGYF AIKIGGAKRG ILFTSVFAGL SSSTALTLQF SHLSREQASI
SPLLASGILL SCGTMFPRLL IVLSVINPQL VKLLWPIVMA MMVALYIPAW WIWRKSEVEQ
IEQSNKQTNP LALQSALFFG LVLAVIMLLA HALSDWFGNA GVLILSALSG ITDVDAISLT
LGRQSTKTLS VTTAALGILI AASVNTIVKM GMVIAIGDKK LWHRIAPVMT GCVVVGAGVF
MALYS
|
|---|
| |