| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002961 |
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| Symbol | |
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| ID | 8556691 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 1501518 |
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| End bp | 1502420 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 646406054 |
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| Product | oligopeptide transport system permease protein OppC |
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| Protein accession | YP_003285588 |
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| Protein GI | 262393734 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTAACGA AAAAAGAAAA CCTAGAAGCG ATTGAGAAGT TCTCCGAAAA CTTGGAGATT
GAAGGTCGCA GTCTTTGGCA AGATGCTCGT ATCCGTTTTA TGCGCAACAA AGCGGCAATG
GTGAGCTTAT TCCTTCTTGT TCTAATGACG TTGGCGGTGA TTATTCTGCC AATGATCGCA
CCGCACACCT TTGATGATAC TGACTGGTAC GCAATGCACG TTGCACCGAA TGCTGACCAT
TGGTTTGGTA CCGACAGCTT AGGTCGTGAC TTATACGTAC GCACGCTAAT CGGCGGTCGT
ATTTCGTTGA TGGTGGGGGT CATGGGTGCA TTTGTAGCTG TACTGATTGG TACGCTCTAT
GGCGCAGCAT CTGGTTTTAT CGGCGGTAAA GTTGACCGTG TGATGATGCG TATTCTAGAG
ATTTTGTACG CGGTACCGTT TATGTTCCTG GTAATCGTAC TTGTGACATT CTTCGGTCGT
AACATCATGC TGATCTTTGT CGCGATTGGT GCTATCGCAT GGCTAGATAT GGCGCGTATT
GTACGTGGTC AGACACTCAG CTTACGTAGC AAGGAGTTCA TCGAAGCTGC ACACGTGTGT
GGTGTTAGCA ACTGGAAAAT TATCACTCGT CATATCGTGC CGAACGTACT GGGTATTGTA
GCGGTATACT CCACGCTACT TATCCCGAGC ATGATCCTGA CGGAGTCATT CCTATCATTC
CTTGGTCTTG GTGTTCAGGA ACCGATGACA AGTTGGGGCG CGCTTCTACA AGAAGGTGCA
CAGACAATGG AAGTGGCAAT CTGGCAGCTG GCATTCCCAG CCGTGTTCAT GGTTGTGACG
CTATTCTGCT TCAACTACGT TGGTGACGGC CTGCGCGATG CGCTGGATCC AAAAGACAGA
TAA
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| Protein sequence | MLTKKENLEA IEKFSENLEI EGRSLWQDAR IRFMRNKAAM VSLFLLVLMT LAVIILPMIA
PHTFDDTDWY AMHVAPNADH WFGTDSLGRD LYVRTLIGGR ISLMVGVMGA FVAVLIGTLY
GAASGFIGGK VDRVMMRILE ILYAVPFMFL VIVLVTFFGR NIMLIFVAIG AIAWLDMARI
VRGQTLSLRS KEFIEAAHVC GVSNWKIITR HIVPNVLGIV AVYSTLLIPS MILTESFLSF
LGLGVQEPMT SWGALLQEGA QTMEVAIWQL AFPAVFMVVT LFCFNYVGDG LRDALDPKDR
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