| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002959 |
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| Symbol | |
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| ID | 8556689 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 1498777 |
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| End bp | 1500453 |
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| Gene Length | 1677 bp |
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| Protein Length | 558 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 646406052 |
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| Product | oligopeptide ABC transporter periplasmic oligopeptide-binding protein OppA |
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| Protein accession | YP_003285586 |
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| Protein GI | 262393732 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATAAGA ATAAAATCAC GCGCGCTTTA TTTATTGGTG CTGGTCTTTC TCTCGCTTTA
GCTGGTTGTG GCGAAAAGCC TGCAGAGAAA CAAGCTGCTG AGCCTGCTCC GGTTCCAGCC
CCTGAAGCTA AATCTGATTC TAAAGAGCCA AAACTTGCTG CTGTTCAAGA ATTGGTGCGT
GGTAACGGTA CAGAAGTTGC GACAATAGAC CCTCATAAAT CTCAAGGTGT TCCAGAATCC
CACGTGATTC GCGATCTTCT TGAAGGCCTA GTAAACCAAG ATGCGGACGG TAACACTATC
CCTGGTGTTG CAGAATCTTG GGAAACTGAA GACAACAAAA CATACACTTT CCACCTACGT
GAAGACGCAA AATGGTCTAA CGGTGATCCT GTTACTGCAG GTGATTTTGT ATACAGCTTC
CAACGCGCAG TCGACCCAGC AACCGCTTCT CCATACGCTT GGTACATGGA ATACACCAAG
ATGAAGAACG CAAAAGACAT TGTTGCGGGT AAAAAAGACA AGAGTGAGTT GGGTGTTAAA
GCGGTTGACG ACCACACGTT AGTGGTTGAG CTAGACACTG CTGTACCATA CTTTGTGATG
ATGATGGGCC ACACAACAGT GAAGCCTGTT CACCAAGCAA CCGTTGAAAA GTTCGGAGAT
CAATGGACGA AGCCTGAGAA CTTTGTAGGT AACGGTGCTT ATGTTGTTGA CAACTGGGTT
GTAAACGAGC GTTTAGTTCT AAAACGTAAC GAACAATACT GGGACAACGA AAACACGACG
CTTGATCAAG TTACTTTCCT ACCAATCGAA AACCAAGTAG CGGAAATGAA CCGCTTCCTA
GCAGGTGAAA TCGACTTCAC GAATGAACTG CCTACAGAGC ACTTCAAGCG TTTGAAGCAA
GAGCATCCAG AAGACGTGTC TGTATCGGGT AACTTGTGTA CTTACTACTA CATCTTCAAC
ACGAAGAAAA AGCCGTTTGA TGATGTTCGC GTACGTAAAG CGATTTCTTA TGCGATTGAC
CGTAATATCG TGACTGATGC GATCCTAGCA CAGGGTCAAA AGCCAGCTTA TTTCCTAACG
CCTGAAATCA CGGCGGGTTT CAACCCAGAA ATCCCTGCAT ACGGCAAAAT GACACAAGAA
GAGCGTAACG CTGAAGCGGC GCGTCTATTG GAAGAAGCGG GTTACGGCGC AGACAACCCT
CTTGAATTTA ACCTTCTATA CAACACGTCA GAGAACCACA AGAAACTTGC GGTTGCACTG
GGTTCAATGT GGAAGAAGAC GCTTGGTCTA GACGTTACGC TAGAAAACCA AGAGTGGAAA
ACTTACCTAT CTACCAAAGA TTCTGGCAAC TTTGAGGTTG CTCGTGCAGG TTGGTGTGGC
GACTACAACG AAGCTTCATC TTTCCTAACG CTGATGATGA GTAATAACAC TACTGGTGGT
ATTCACTACG ACAGCAAAGA GTACGATGCA ATCATGAACA AAGCATTTGC TTCAACTTCT
GACGAAGAGC GTCAAGCGCT TTACCTAGAA GCAGAGAAGT TGATGGCAAA AGATATGCCA
ATCGCACCTA TCTACCAGTA CGTGAAATCA CGTCTACTAT CACCGAAAGT TGGTGGCTTC
CCAGTCAATA ACGCGGAAGA CAAGATTTAC TCTAAAGATC TCTACATCAC AGAGTAA
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| Protein sequence | MYKNKITRAL FIGAGLSLAL AGCGEKPAEK QAAEPAPVPA PEAKSDSKEP KLAAVQELVR
GNGTEVATID PHKSQGVPES HVIRDLLEGL VNQDADGNTI PGVAESWETE DNKTYTFHLR
EDAKWSNGDP VTAGDFVYSF QRAVDPATAS PYAWYMEYTK MKNAKDIVAG KKDKSELGVK
AVDDHTLVVE LDTAVPYFVM MMGHTTVKPV HQATVEKFGD QWTKPENFVG NGAYVVDNWV
VNERLVLKRN EQYWDNENTT LDQVTFLPIE NQVAEMNRFL AGEIDFTNEL PTEHFKRLKQ
EHPEDVSVSG NLCTYYYIFN TKKKPFDDVR VRKAISYAID RNIVTDAILA QGQKPAYFLT
PEITAGFNPE IPAYGKMTQE ERNAEAARLL EEAGYGADNP LEFNLLYNTS ENHKKLAVAL
GSMWKKTLGL DVTLENQEWK TYLSTKDSGN FEVARAGWCG DYNEASSFLT LMMSNNTTGG
IHYDSKEYDA IMNKAFASTS DEERQALYLE AEKLMAKDMP IAPIYQYVKS RLLSPKVGGF
PVNNAEDKIY SKDLYITE
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