Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_002916 |
Symbol | |
ID | 8556644 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | + |
Start bp | 1454899 |
End bp | 1455447 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 646406007 |
Product | protein ydjA |
Protein accession | YP_003285543 |
Protein GI | 262393689 |
COG category | [C] Energy production and conversion |
COG ID | [COG0778] Nitroreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACGCTC TCGATCTTTT GCTCAATCGC CGATCTATCG CGAAGTTATC TGCGCCTGCA CCAGAAGGTA AAGCTCTTGA GAACATCATT CGTGCAGGCC TTCGTGCGCC TGACCATGCG GGATTAACCC CTTGGCGTTT CGTTATCGCA CAGGGCGATG GTTTGAAAAA ACTGTCAGAT ATCTTGGTAA AAGCGGCAGA AGCTGAAAAT AGTGATGAAG CGGTGGTCGA AAAGGTAAAG AATGCACCAT TTCGCGCACC AATGGTGATC ACGGTGATTG CTAAAGTAAC GGAACATGAG AAAGTGCCAG CACTAGAGCA ACACTTATCT GCGGGATGCG CTGTACAAGC GATGCAAATG GCAGCCGTAG CACAAGGCTT TCAAGGTTTT TGGCGCTCAG GTAAGTGGAT GTTCCATCCA GAAGTTCATC AAGCGTTTGG TTTAGAAGGC GACGATGAGA TTGTTGGTTT CTTGTACCTA GGTACGCCTG GTTGTACACC GATGAAAGTT CCTGAGCGTG ACCTCTCTCA GTTTGTTGAA TTTCTATAA
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Protein sequence | MDALDLLLNR RSIAKLSAPA PEGKALENII RAGLRAPDHA GLTPWRFVIA QGDGLKKLSD ILVKAAEAEN SDEAVVEKVK NAPFRAPMVI TVIAKVTEHE KVPALEQHLS AGCAVQAMQM AAVAQGFQGF WRSGKWMFHP EVHQAFGLEG DDEIVGFLYL GTPGCTPMKV PERDLSQFVE FL
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